LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso5g0859	ATGAACTCAAGCTCCAATCTCAAAATGGAAGCAATTTCTTATTCAATCCCCTCCACCAAATTGCACTCCTCTCTTCATATTTACACGGGCGTTACACGAATTCGATCCTCTAACCTCCTTCTTCGCCCTCCCCCTATTTCAATTAAACCTCTATATTCCCCCAATTTTCTCATTCTCCATCGCCACAGACTTCGCTGCGTCGCAGAATCCTCCAATAATCACCACCACAATCATCATCACGACCATGACCACGGTCACAACCACCACCATCACCATCACCATCACCACTCACACGGCATCCACGGCGCTGATCTCACCGGCCCTCAAAAAGCTGTCATCGCGTTCGCGAAAGCCACCAGATGGATGGACCTGGCAGACATCCTGAGGGAGCACCTGCATCTATGCTGCTTCTCCACCGCTCTATTCGTAGCCGCCGCAATTTGCCCTCACACCTTGCCTAAGCCACTTATCAAGCCTCTTCAAAACTCTCTCATCTTCGTCGCCTTTCCTCTGGTTGGGGTTTCTGCATCACTTGACGCTCTCCTTGAAATCAGCAGTGGAAAGGTGAACATCCATGTGCTAATGGCAATGGCAGCCTTTGCGTCGATATTCATGGGAAACTCTTTGGAAGGAGGCTTGCTTCTTGCCATGTTTAACCTCGCGCATATCGCCGAAGAGTATTTCACCAGCCGGTCGATGGTTGATGTTAGGGAATTGAAGGAAAATAATCCAGATTTCGCCCTTGTTCTGGATACCAATGATGATAAACTCCCCAATACGTTTGACTTGGCGTACAAGAGGGTTCCCGTGCATGATGTAACTGTAGGATCATATATTCTGGTTGGCGCTGGTGAGTCTGTGCCAGTAGATTGTGAAGTATTCCAAGGAAGTGCCACAATTACCACCGAGCACTTGACAGGGGAAGTCAAACCTTTGGAAGCCAAAGTTGGAGATAGAATTCCTGGTGGTGCAAGGAACTTAGATGGGAGGATAATCGTGGAGGTAACCAAAACTTGGAAGGAATCAACTCTCAGCAGAATTGTTCAGTTGACTGAAGAAGCACAGTCAAATAAACCTAAACTTCAAAGGTGGCTTGATGAATTTGGTGAACGCTATAGCAAAGTTGTTGTGGTGTTATCAATTGCTATTGCTGTTATTGGGCCATTTTTATTTAAGTGGCCATTCATTAGTACATCTGCTTGCAGAGGTTCAATTTACAGAGCCTTAGGGCTTATGGTGGCAGCATCCCCTTGTGCCTTGGCTGTGGCCCCATTGGCATATGCTATAGCAATCAGCTCCTGTGCCAGAAAGGGGATATTACTCAAAGGTGGGCATGTTCTGGATGCTCTAGCTACTTGTCATACTGTTGCCTTTGACAAAACAGGGACATTGACAACTGGTGGACTCGTATTCAAGGCAATTGAGCCCATTTATGGTCATCATGTTAGAAACAATAAATCAAATGTTCCTTCCTGTTGCATTCCCACCTGTGAAAAAGAAGCTCTTGCTGTTGCTGCAGCTATGGAAAAGGGTACTACTCACCCTATTGGAAGGGCTGTGGTTGACCATAGTGAAGGCAAAGACCTCCCATCTATTTCTGTTGAAAGTTTCGAATACTTTCCTGGTAGAGGCCTTACTGCTACTGTTAACAGCATTGAGTCAGGAACTGGAGGTGCTAAACTATTGAAAGCATCACTTGGATCTATAGATTTCATCACCTCTTTTTGTCAATCTGAAGTCGAGTCAGAAAAGATCAAGGAAGCTGTTAATACATCTTCTTATGGAAGTGAATATGTTCATGCTGCCCTTTCAGTTAATCAGAAGGTAACATTGATTCATCTAGAGGATAGGCCTCGTCCTGGGGTTTCTAATGTTATTCAAGAATTGCAAGATGAAGCAAAGTTTCGTGTGATGATGTTAACTGGTGATCATGAGTCTAGTGCAAGGAGAGTTGCAAGTGCTGTGGGCATCAATGAGTTTCATTGCAACCTGAAGCCTGAAGACAAGCTGAGTCATGTAAAGGATATCTCAAGAGATATGGGGGGAGGCTTAATTATGGTTGGTGAAGGCATCAATGATGCCCCAGCACTAGCTGCTGCAACTGTTGGGATAGTTCTTGCTCACCGTGCTAGTGCAACTGCCATAGCTGTTGCAGATGTATTGTTGCTTAGAGAAAACATTTCTGCAGTGCCATTTTGTATTGCCAAGTCTCGTCAAACAACTTCACTGATTAAACAAAATGTGGCTTTAGCATTGACGTCCATTGTCATGGCTTCCCTTCCATCAGTTTTGGGATTTCTGCCATTGTGGTTAACGGTTCTTTTACATGAAGGTGGAACCTTGCTTGTCTGTCTTAATTCTGTACGTGCTCTGAATGAACCATCTTGGTCCTGGAAGCATGATATATCACATTTGATTAGCGAGATTAAATCTAGACTCCTCTCTCTCAAGACAAATATCACGGGCTCAAACAGTATCATGACGGCGAATTTGTAA	2496	0.4479	MNSSSNLKMEAISYSIPSTKLHSSLHIYTGVTRIRSSNLLLRPPPISIKPLYSPNFLILHRHRLRCVAESSNNHHHNHHHDHDHGHNHHHHHHHHHSHGIHGADLTGPQKAVIAFAKATRWMDLADILREHLHLCCFSTALFVAAAICPHTLPKPLIKPLQNSLIFVAFPLVGVSASLDALLEISSGKVNIHVLMAMAAFASIFMGNSLEGGLLLAMFNLAHIAEEYFTSRSMVDVRELKENNPDFALVLDTNDDKLPNTFDLAYKRVPVHDVTVGSYILVGAGESVPVDCEVFQGSATITTEHLTGEVKPLEAKVGDRIPGGARNLDGRIIVEVTKTWKESTLSRIVQLTEEAQSNKPKLQRWLDEFGERYSKVVVVLSIAIAVIGPFLFKWPFISTSACRGSIYRALGLMVAASPCALAVAPLAYAIAISSCARKGILLKGGHVLDALATCHTVAFDKTGTLTTGGLVFKAIEPIYGHHVRNNKSNVPSCCIPTCEKEALAVAAAMEKGTTHPIGRAVVDHSEGKDLPSISVESFEYFPGRGLTATVNSIESGTGGAKLLKASLGSIDFITSFCQSEVESEKIKEAVNTSSYGSEYVHAALSVNQKVTLIHLEDRPRPGVSNVIQELQDEAKFRVMMLTGDHESSARRVASAVGINEFHCNLKPEDKLSHVKDISRDMGGGLIMVGEGINDAPALAAATVGIVLAHRASATAIAVADVLLLRENISAVPFCIAKSRQTTSLIKQNVALALTSIVMASLPSVLGFLPLWLTVLLHEGGTLLVCLNSVRALNEPSWSWKHDISHLISEIKSRLLSLKTNITGSNSIMTANL*	832

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso5g0859	831	Gene3D	-	450	738	IPR023214	-
	Gso5g0859	831	SUPERFAMILY	Calcium ATPase, transmembrane domain M	193	772	IPR023298	-
	Gso5g0859	831	ProSitePatterns	E1-E2 ATPases phosphorylation site.	459	465	IPR018303	-
	Gso5g0859	831	SFLD	Haloacid Dehalogenase	439	740	-	-
	Gso5g0859	831	PRINTS	P-type cation-transporting ATPase superfamily signature	301	315	-	-
	Gso5g0859	831	PRINTS	P-type cation-transporting ATPase superfamily signature	457	471	-	-
	Gso5g0859	831	PRINTS	P-type cation-transporting ATPase superfamily signature	610	621	-	-
	Gso5g0859	831	PRINTS	P-type cation-transporting ATPase superfamily signature	633	643	-	-
	Gso5g0859	831	PRINTS	P-type cation-transporting ATPase superfamily signature	687	706	-	-
	Gso5g0859	831	PRINTS	P-type cation-transporting ATPase superfamily signature	711	723	-	-

Showing 1 to 10 of 24 entries

Previous1 2 3Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso5g0859	Gso-Chr5	28095847	28113142	Wgd

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso5g0859	91	812	Primary Pumps ATPases	AT4G37270	76.454	0.0	1103

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso5g0859	K01534		-	gmx:100776309	1483

Showing 1 to 1 of 1 entries

Event-related genes

Show entries

Search:

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso5g0859	5	28095847	28113142	Gso17g1414	17	15213908	15228332	GST

Showing 1 to 1 of 1 entries