Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0850 ATGAGTCTCCTCTTTCAAACTCTGATAATCTCATTGGTTCTTGTTAACCAATGTTGTGCTCTAAGTAGAGACGGTGTTTTGTTACTCTCTTTCAAGTACGCTGTGTTAAACGACCCACTCTACGCTCTCGCAAACTGGAACTACAGTGACGAGACACCGTGTTCCTGGAACGGAGTTTCTTGTTCCACGGAAAACCGCGTCACATCGTTGTTTCTTCCCAATTCTCAGCTTCTAGGTTCGGTTCCTTCCGATCTGGGTTCTATTGAACATCTTCAAATTCTTGACCTTTCCAACAACTCCCTTAACGGGTCTCTTCCTTCGTCTCTCTCCCAAGCCTCCGAGCTTCGGTTCCTTAACCTCTCCAACAACCTTATCACAGGTGAGGTTCCGGAGTCCATAACTCAGCTTCGGAATCTTGAGTTTCTTAACCTCTCCGACAATGACTTGGCGGGAAAATTGCCTGAAGGCTTTTCCAACATGCAAAACCTAACTCAGGCTTCGTTCAAGAACAATTACTTGTTCGGCTTTCTTCCCAGCGGGTTAAGAACGTTGCAGGTTTTGGATCTGTCTGCAAACCTCTTGAACGGTTCTCTTCCCACGGATTTCGGCGGTGATGTCATGCGTTACTTGAACATCTCCTACAACAGATTCTCCGGCGAAATCCCGACGGAGTTCGCGGCGAGGATTCCGGGAAACGCCACCGTTGATCTCTCTTTCAACAACTTAACCGGCGAAGTTCCTGACTCCGCTGTATTCACGAATCAGAATTCGAAGTCTTTCTCTGGCAACGTTAATCTGTGTGGAGAAATGACAAAGAACCCATGTCCTATTCCTTCTTCGCCGTCGTCGGAACCGAAAGCTTCCGCTCCTATTTCTCCTCCTGCAATCGCCGCAATCCCGAAGAATTTAGACGATTCTCCGCTGGCGCCGACGGGGCAGAAACAGAGTGGTCTCAAACAAGGAACGATCATAGGAATCGTGGTGGGAGACGTCGTCGGCGTCGGAATCTTGGCCGTGCTGTTTGTCTACGTGTACCGGTTGAAGAAAAAGAAGGAGGAGGAGGGTTCAAAGACGAACAACGAAGCGGCTATAACAAGGAGCAGAAGCGAGAGTTCTTCGTCGACAACCTCGGAGTCAAGAGGCTTCACGAGGTGGTCGTGTTTGAGGAAGAGAACGGAAGAGGAAGAGTCTTCGGAGACAACAAGCTCTTCCGATAGCGACTTGGAGGGTGCCGCCGCCGCAGGACAGAATAACCAGAATCTTAATAATAATCACAATAATAGTAAGGGTCCGCAACAAGAGAACAACAAAACGGGGACTCTTGTTACGGTGGACGGTGAACGACAACTCGAGCTCGAAACGCTGCTGAAGGCTTCGGCGTACATATTGGGCGCCACGGGGTCCAGCATAATGTACAAGGCCGTGCTCGAAGACGGCACGTCGTTGGCGGTTCGGAGAATTGGCGAGAGCGGCGTGGAGCGGTTCAAGGACTTCGAGAACCAGGTTCGGGTTATTGCTAAACTGGTGCACCCTAATCTGGTTCGCGTTCGGGGATTCTATTGGGGACACGATGAGAAGCTCATCATCTACGACTTCATTCCGAACGGTTGCCTCGCCAATGTTCGTTACAGGAAGTTGGGGCTATCGCCGAGTCATTTGCCGTGGGAAATCCGGCTCAAGATAGCAAAAGGGGTGGCACGTGGGCTGGCTTACCTCCACGAGAAGAAGCACGTGCATGGAAACTTGAAGCCTAGCAATATTCTGTTAGGCAACGACATGGAGCCCAAGATTGGAGACTTTGGGCTTGAGAGGATAGTGACGGGTGACACAAGCTATAAGGCTGGCGGGTCCGCGCGTATTTTTGGGAGCAAGAGATCCACAGCGTCACGAGATAGTTTCCAAGATATCACGTTTGGGCCAAGCCCAAGCCCAAGCCCGAGTTCAATAAGTGGTGTGTCTCCTTACCATGCACCCGAGTCGCTCAGGAACCTCAAGCCTCACCCCAAGTGGGACGTGTACTCTTTTGGGGTCATGTTTCTTGAGCTGCTAACGGGGAAGATTGTGGTTTTGGATGATATGGGCCAAGGGCCCGGGCTTTTGGTGGAGGATAATAATCGGGCCTTGCGCATGGTTGATATGGCTATACGGGCCGACATGGAGTGTAGGGAGGAGGCCTTGTTGGCCTACTTCAAGCTAGGGTATAGTTGTATGTCTAGCGTTCCGCAAAAAAGGCCTCCAATGAAGGAGGTGCTACAAGTTCTTGAAAAGATCTCATCCTCCTCTTCTTCGTCCTCCTATTATTATAGTGTCTAA 2313 0.5041 MSLLFQTLIISLVLVNQCCALSRDGVLLLSFKYAVLNDPLYALANWNYSDETPCSWNGVSCSTENRVTSLFLPNSQLLGSVPSDLGSIEHLQILDLSNNSLNGSLPSSLSQASELRFLNLSNNLITGEVPESITQLRNLEFLNLSDNDLAGKLPEGFSNMQNLTQASFKNNYLFGFLPSGLRTLQVLDLSANLLNGSLPTDFGGDVMRYLNISYNRFSGEIPTEFAARIPGNATVDLSFNNLTGEVPDSAVFTNQNSKSFSGNVNLCGEMTKNPCPIPSSPSSEPKASAPISPPAIAAIPKNLDDSPLAPTGQKQSGLKQGTIIGIVVGDVVGVGILAVLFVYVYRLKKKKEEEGSKTNNEAAITRSRSESSSSTTSESRGFTRWSCLRKRTEEEESSETTSSSDSDLEGAAAAGQNNQNLNNNHNNSKGPQQENNKTGTLVTVDGERQLELETLLKASAYILGATGSSIMYKAVLEDGTSLAVRRIGESGVERFKDFENQVRVIAKLVHPNLVRVRGFYWGHDEKLIIYDFIPNGCLANVRYRKLGLSPSHLPWEIRLKIAKGVARGLAYLHEKKHVHGNLKPSNILLGNDMEPKIGDFGLERIVTGDTSYKAGGSARIFGSKRSTASRDSFQDITFGPSPSPSPSSISGVSPYHAPESLRNLKPHPKWDVYSFGVMFLELLTGKIVVLDDMGQGPGLLVEDNNRALRMVDMAIRADMECREEALLAYFKLGYSCMSSVPQKRPPMKEVLQVLEKISSSSSSSSYYYSV* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0850 770 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Gso5g0850 770 Gene3D Phosphorylase Kinase; domain 1 422 532 - -
Gso5g0850 770 MobiDBLite consensus disorder prediction 360 383 - -
Gso5g0850 770 MobiDBLite consensus disorder prediction 275 316 - -
Gso5g0850 770 SUPERFAMILY L domain-like 23 268 - -
Gso5g0850 770 Gene3D Ribonuclease Inhibitor 182 277 IPR032675 -
Gso5g0850 770 SUPERFAMILY Protein kinase-like (PK-like) 462 758 IPR011009 -
Gso5g0850 770 SMART LRR_typ_2 136 159 IPR003591 -
Gso5g0850 770 SMART LRR_typ_2 181 204 IPR003591 -
Gso5g0850 770 SMART LRR_typ_2 88 112 IPR003591 -
Gso5g0850 770 PANTHER BNACNNG22430D PROTEIN 5 767 - -
Gso5g0850 770 MobiDBLite consensus disorder prediction 384 398 - -
Gso5g0850 770 Gene3D Transferase(Phosphotransferase) domain 1 534 767 - -
Gso5g0850 770 Pfam Protein kinase domain 463 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g0850 770 MobiDBLite consensus disorder prediction 632 655 - -
Gso5g0850 770 MobiDBLite consensus disorder prediction 403 438 - -
Gso5g0850 770 Pfam Leucine rich repeat 90 149 IPR001611 GO:0005515
Gso5g0850 770 ProSiteProfiles Protein kinase domain profile. 457 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g0850 770 PANTHER OS05G0588300 PROTEIN 5 767 - -
Gso5g0850 770 PRINTS Leucine-rich repeat signature 91 104 - -
Gso5g0850 770 PRINTS Leucine-rich repeat signature 136 149 - -
Gso5g0850 770 MobiDBLite consensus disorder prediction 632 654 - -
Gso5g0850 770 MobiDBLite consensus disorder prediction 351 438 - -
Gso5g0850 770 Gene3D Ribonuclease Inhibitor 20 181 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0850 Gso-Chr5 27531944 27535350 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0850 9 768 Receptor kinase-like Gene Family AT4G37250 58.493 0.0 838
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso5g0850 Pkinase 1.9e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0850 - - gmx:100776204 1372.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0850 5 27531944 27535350 Gso17g1419 17 15441191 15444519 GST