Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0825 ATGGATTGGGTTCGAGGAGACGCCCTCGGGCGAGGAAGCTTCGCTACCGTTAGTTTAGCGATTCCGACTACAAATCCGAATCAGTTTCCGTCTCTAACCGCCGTTAAGTCCGCGGAGGCTCAAACCTCGTGCTGGCTAAGAAACGAGAAACACGTGCTGGATCGCCTAGGTTCGTCGTCTCCGAGGATAATTCGCTGCTTCGGAGACGACTGCAGTTTCGAGAACGGCGTTGAGTACTACAATCTGTTCCTCGAATACGCCGCCGGCGGGAGCCTTGCCGATGAATTGAAGAATCACGATGGCCAGATTTCCGAGCATGAGGCTCGGGAATACACGAGGGCCATCGTGGAGGGTCTGAGCCACGTGCACAAAAGCGGGTTTGTTCACTGCGACATAAAGCTGCAGAACATCCTCGTATTCGGGGACGGAGGTATCAAAATTGCGGATTTCGGGCTTGCGAGGGAGGCAGGGCAGAAACAGGAGAAGAGTGAATGCAGGGGGACTCCGATGTTTATGTCGCCGGAGCAAGCGACCGGCGGCGAGTGCGAATCGCCGGCCGATATATGGGCTTTGGGATGTACAATTGTGGAGATGGTGACCGGGAAACCGGCGTGGCAGGTGGAGAAGGGGGCGAGCATGTGGTCGCTGTTGCTTCGAATTGGGGTGGGAGAAGAGGTTCCCGAGATCCCTAATAATTTGTCCGAAGATGGAAAAGATTTTATTGAAAAATGTTTTATTAAGGATCCTAAGAAGAGGTGGAGCGCAGAAATGCTATTGAAACACCCTTTTCTTATTAATGATGGCACTGTTCCATTTAAGCGCGTTCATGAGTCGCCGAGAAGCCACTTTGATTTCCCCGATTGGGTTTCTAGCGTGACGAATTCGCTTCCCAGTTCGCCGGAATTTCAAGACAAGTGGGATTTTGATGACGGGTTCTGTTCGCCGGAGGACCGGCTCCGGCAGCTTTTGACGGTTAATCGGCCGGCGAGTTGGTCAGAATCGGATGGGTGGAGTAGTGTTAGGTGA 1026 0.5292 MDWVRGDALGRGSFATVSLAIPTTNPNQFPSLTAVKSAEAQTSCWLRNEKHVLDRLGSSSPRIIRCFGDDCSFENGVEYYNLFLEYAAGGSLADELKNHDGQISEHEAREYTRAIVEGLSHVHKSGFVHCDIKLQNILVFGDGGIKIADFGLAREAGQKQEKSECRGTPMFMSPEQATGGECESPADIWALGCTIVEMVTGKPAWQVEKGASMWSLLLRIGVGEEVPEIPNNLSEDGKDFIEKCFIKDPKKRWSAEMLLKHPFLINDGTVPFKRVHESPRSHFDFPDWVSSVTNSLPSSPEFQDKWDFDDGFCSPEDRLRQLLTVNRPASWSESDGWSSVR* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0825 341 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Gso5g0825 341 SMART serkin_6 3 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g0825 341 SUPERFAMILY Protein kinase-like (PK-like) 3 298 IPR011009 -
Gso5g0825 341 Gene3D Transferase(Phosphotransferase) domain 1 2 305 - -
Gso5g0825 341 Pfam Protein kinase domain 6 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g0825 341 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 295 - -
Gso5g0825 341 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 295 - -
Gso5g0825 341 CDD STKc_MAPKKK 2 264 - -
Gso5g0825 341 ProSiteProfiles Protein kinase domain profile. 3 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g0825 341 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0825 Gso-Chr5 25746588 25748288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0825 1 341 MAP Kinase Kinase Kinase AT4G36950 51.873 1.60e-111 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gso5g0825 Pkinase 3.1e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0825 - - gmx:100799752 712.99