Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0816 ATGGAAGTCGTCCGAGTAATCTCCACAACAACAATCAGGGAACCCAATCACAATAACTCGACTCAGAAAATCGATTTAACTCCGTGGGATCTCCGACTCCTCACAATTGAAACCATCCGAAGAGGGCTTCTTTTTCGCAACGAAAAGCACACACCAAACCAAATCAAACACCTCCAACACTCCCTTTCTTCCACTCTAGCCTTCTTTCCACCCCTCGCAGGTCGTCTCGTCATTCTCGAACATCACGACAACATTGTCTCGTCCCACATCGTATGCAACAACGCAGGAGCACTCTTTGTCCACGCCGTTGCAGACAACACCACCGTCGCCGACATTCTTCAACCCAAATACGTTCCTCTCATTGTTCGCTCCTTCTTTCAACTCAACGGCGTTAGAAACTACGAAGGCACGTCACAGCCCTTGTTGGCAGTGCAAGTCACGGAGCTAGTTGACGGCATCTTCGTCGCCGTCACAATCAACCACATCGTTGCCGACGGCAAGTCGTTTTGGCATTTCGTGAATTCCTGGGCTGAAATTTCACGTGGTAACCCTAAAATATCCAAACTCCCTACTCTGCAACGTTGCTTTCTGGATGGCATAGACTGCCCCATACTGTTTCCTTTCACAAAGGAGGAACACTTACACTCCCCAAACCTCAAACGACAACCTCTTCCTAATAGGATCTTCCATTTTACAAAGGAAAAAGTCTTGGAACTGAAATCAAAAGCGAACGCAGAAGCCAACACCGACAAAATAATATCTTCTCTGCAAGCACTATTAACTCTCCTTTGGCGTTCTGTGATTCGTTGCCAACATGTGGGGCCACAAGAAGAGGTTCATTTTGTTCTGCTGATTGGCGTTAGAGCCAGGATGATTCCACCACTTGAAGAGGATTATTTCGGAAACGCGATTCTGGCTGGTCGTGTTACCATGAAAGCAGGGGAACTATTAGAGGGTGGGCTCGGAAAGGGTGCTTTGGAGATAAACAAGATGATTTCTTTGCACTCTCATGAGAAAGTAAAGAACCACTATGAGTCTTTGGCGAGAACCCCAATGCTTTCAACGCCGGGTATTGGCGCTGCTAATTCCTTGATGATTAGCAGTTCACCGAGGTTTGACATTTACGGTAACGATTTCGGGTGGGGAAAGCCTGTGGCCGTTCGAAGTGGAGATGCAAATATTGGTAACGGAAAGGTTACTGTGTTTGCTGGTTCTAAAGAAGATTCAATTGATATTCACGTGAGCCTTCCTTATGAGATTTTGGAGGCAATGGGAAATGACCCTGAGTTCGTGGATGCCATTTCCTATTAG 1311 0.4668 MEVVRVISTTTIREPNHNNSTQKIDLTPWDLRLLTIETIRRGLLFRNEKHTPNQIKHLQHSLSSTLAFFPPLAGRLVILEHHDNIVSSHIVCNNAGALFVHAVADNTTVADILQPKYVPLIVRSFFQLNGVRNYEGTSQPLLAVQVTELVDGIFVAVTINHIVADGKSFWHFVNSWAEISRGNPKISKLPTLQRCFLDGIDCPILFPFTKEEHLHSPNLKRQPLPNRIFHFTKEKVLELKSKANAEANTDKIISSLQALLTLLWRSVIRCQHVGPQEEVHFVLLIGVRARMIPPLEEDYFGNAILAGRVTMKAGELLEGGLGKGALEINKMISLHSHEKVKNHYESLARTPMLSTPGIGAANSLMISSSPRFDIYGNDFGWGKPVAVRSGDANIGNGKVTVFAGSKEDSIDIHVSLPYEILEAMGNDPEFVDAISY* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0816 436 Gene3D - 3 202 IPR023213 -
Gso5g0816 436 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 433 - -
Gso5g0816 436 Pfam Transferase family 4 430 - -
Gso5g0816 436 Gene3D - 209 426 IPR023213 -
Gso5g0816 436 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 3 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0816 Gso-Chr5 24126793 24128485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0816 58 419 Monolignol Biosynthesis Gene Families AT5G48930 29.178 1.17e-31 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0816 - - gmx:100797643 872.463