Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0813 ATGTCTGGTAGATTTGATAGTGAAATTGATATTGGTGTTCCTGATGAAGTTGGAAGACTTGAAGTCCTTCGCGTACATACCAAAAACATGAAGCTTTCAGATGCTGTTGATCTAGAGAGAATTGCAAAAGATACTCATGGATATGTTGATGCTGACCTTACTGCCCTTTGCACTGAAGCTGCTCTTCAATGCATCAGGGAGAAGATGGATGTCATTGATTTGGAAGATGAGAGTATTGATGCTGAAGTGCTGAATTCTATGGCAGTTTCAAATGAGCATTTCCATACTGCTCTGGGAACAAGCAATCCATTTGCTTTACGAGAAACTGTTGTTGAGGTGCCTAAGGTCAGCGGGGAGGATATTGGAGGCCTTGAGAATGTCAAGCGTGAGCTGCAAGAGGATGTGGAAAAACTTTGTTGGCCAAAGCAATTGCTAATGAATGTCAAGCTAATTTCATCAGTGAGGGGCCCAGAATTGCTCACTATGTGGTTTGGTGAAAGTGAAGCCAATGTTCGAGAAATTTTTGACAAGGCCAGACAATCAGCTCCATGTGTCCTCTTTGATGAGCTTGATTCCATTGCTACTCAGGTCTATTTTTGTACTTCGCATCCATGCAGGCCAGGTTGA 627 0.4274 MSGRFDSEIDIGVPDEVGRLEVLRVHTKNMKLSDAVDLERIAKDTHGYVDADLTALCTEAALQCIREKMDVIDLEDESIDAEVLNSMAVSNEHFHTALGTSNPFALRETVVEVPKVSGEDIGGLENVKRELQEDVEKLCWPKQLLMNVKLISSVRGPELLTMWFGESEANVREIFDKARQSAPCVLFDELDSIATQVYFCTSHPCRPG* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0813 208 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 193 IPR027417 -
Gso5g0813 208 Pfam ATPase family associated with various cellular activities (AAA) 152 196 IPR003959 GO:0005524|GO:0016887
Gso5g0813 208 Gene3D - 13 102 - -
Gso5g0813 208 Pfam AAA+ lid domain 36 77 IPR041569 -
Gso5g0813 208 PANTHER AAA-FAMILY ATPASE 152 197 - -
Gso5g0813 208 PANTHER AAA-FAMILY ATPASE 3 136 - -
Gso5g0813 208 PANTHER CELL DIVISION CYCLE PROTEIN 48 HOMOLOG 3 136 - -
Gso5g0813 208 PANTHER CELL DIVISION CYCLE PROTEIN 48 HOMOLOG 152 197 - -
Gso5g0813 208 Gene3D - 153 196 IPR027417 -
Gso5g0813 208 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 100 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0813 Gso-Chr5 23995929 24000595 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0813 3 83 Calmodulin-binding Proteins AT3G56690 29.630 1.21e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0813 K13525 - gmx:100796045 418.313