Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0797 ATGGAAGCATCGGAGATTTGTTCCGTCAAAGTCGCTCTTCATATTCGTCCTCTCATTGCCGATGAACGACAACAAGGTTGCATTGAATGTGTTTCCGTTACGCCTTCGAAGCCTCAGGTTCAAATTGGGTCGCATGCCTTTACATTTGATTATGTTTATGGTAATGGTGGATCTCCTTCAGTTGACATGTTTGAGGAATGCGTTGCTCCATTGGTTGAAGGCTTATTCCAAGGATACAACGCTACAGTACTTGCCTATGGTCAGACAGGATCTGGGAAAACATATACCATGGGAACTGGCTATAATGACAATTGTCGGAGCGGATTAATTCCTCAGGTTATGAATGCCTTTTTCAACAAGATTGAAACACTAAAGCATCAAACGGAATTTCAGTTGCGAGTCTCCTTCGTTGAGATTTTGAAGGAAGAAGTGAGGGACTTGTTGGATATGGTATCCATGGGCAAACCAGAAACCTCTAACTCTAATGGCCATTCTGGAAAAGTAACTGTTCCTGGGAAGTCACCAATTCAAATTCGTGAAACATCAAATGGAGTAATAACACTGTCAGGAATAACTGAAGTTCCTGTAAGTACATTACATGATATGTCTTCTTACTTGGAACAGGGTTCTTTAAGCAGGGCAACAGGAAGTACAAATATGAACAACCAGTCCAGTCGATCACATGCCATTTTCACAATCACACTACAACAGATGCGCAAACTCCATTCTGGTTCTCCCATCAATGACTCTTCAGACGAGGATATGGGTGAAGAATACCTTTCAGCAAAGCTCCATTTGGTAGATCTAGCTGGATCTGAACGAGCTAAAAGAACAGGTTCTGATGGTGTTCGTTTGAAAGAAGGTATACACATCAATAAAGGTCTTCTTGCTCTTGGTAATGTCATAAGTGCACTGGGGGATGAAAAAAAGAGGAAGGAGGGTGTGCATGTTCCCTATCGGGATAGCAAACTCACTCGACTCTTACAGGATTCACTTGGTGGAAACAGCAAAACTGTCATGATAGCTTGCATTAGTCCTGCTGATATCAATGCTGAGGAAACTCTCAATACTCTCAAGTATGCAAACCGTGCTCGCAATATTCAAAATAAGCCTGTGGTTAATCAAGATTTCATCTCCAATGAGATGCAGCAATTGCGCCAGCAGTTGAAGTACTTGCAGGCTGAACTTTGTTTTCAGGGAGGAGTTCCTGCTGATGAAGTGCGGGTTCTCAAGGAAAGGATTGCTTGGCTTGAGTCTACTAATGAGGACCTCTACAGAGAACTTCACGAATATCGCAGTAGATGTGCTTTTGTAGGGAGATGTGAAATTGATGAACCTGATGGACACATTTATCTCATGAAAACCGATGGGCTTGAGAGGCGGTTTCAGAGCTTAGATTCATCTGATCATTCCCTGGTTGGAAGTCTATCAGGTGAGGATTCTAGGGAAACTGATGAAGCAGCAAAAGAGTTGGAGCATGTACTATTTCAAAATACCATGGATAAAGAGATGAATGAGTTGAATAAGCACTTGGAGCAGAAAGAGTCTGAGATGAAGCTCATTGCAGTTGATACTGAAACACTCAAACAGCACTTCGGGAAGAAAATTTTGGAACTTGAGGAGGAGAAAAGAAAAGTGCAGGAAGAGAGGGACCGTTTATTTCATGAGGTAGAGAATCTTGCTGCTAATTCAGATGGACTAGCACACAAAACTCAAGATGTTCGTGGCCAAAAATTGAAAGCATTGGAAGCACAGATTTTAGACCTCAAGAAGAAACAAGAAAGCCATGTGCAACTATTAAAGCAAAAGGAGAAGAGTGAAGAAGCTGCAAAAAGACTGCAGACTGAGATACAATATATCAAGTCTCAGAAGGTTCAGTTGCAGCATAAAATGAAGCAAGAAGCAGAACAATTTCGACAATGGAAGGCTTCTCGTGAGAAAGAGCTACTCCAGTTGAAAAAGGAGGGAAGAAAAAATGAGTATGAAAGGCATAAGCTTGAGGCTCTAAACCAGCGTCAGAAAATGGTTCTTCAAAGGAAGACAGAGGAAGCAACAATGGCTACGAAAAGGCTAAAAGAATTGTTGGAAGCCCGCAAATCTTCTCCTCGTGACAACTCTGTTTATTCAAATGGGCATCTACAGCCCGCGCTGGTCAATGAAAAATCCCTCCAAAGGTGGCTTGATCAGGAGATGGAGGTCATGGTACATGTGCATGAAGTTCATGCTGAATATGGCAAACAAAATCAAGTCCAAGCTGCACTGGAAGAAGAGTTGGCTCTACTAAAACAGGATCGGTTTTCAGATGGGCAGACTATTCCCAAAGGAAAGAGCAAATATTTGAGGCTGTTATCCATGTCACCAGATGCAAAAGTTGAGAGAATAGCTTCTCTTGAGAACATGCTGTGCATGTCCTCAATTGCTTTGAAAGCCATGGCTTCCCAACTCACTGAGACAGAAGAAAAGGAACGGACATTAAATAACCGAGGTCGTTGGAACCAGCTACGCTCAATGGGAGATGCAAAGAATGTGCTTCAGTATTTGTTCAATGCTACTGCAGAAGCAAGGTGCGAATTGTGGGAAAAAAATATGGAACTTAAGGATTTGAAAGAACAACTAAAAGAGCTTGTAGCACTGCTACAACAAAGTGAAGCACAGAGAGAGGAACTTGTAAGGGAGCAAAAAATAAAGGAACAAGCTGTTGCCATCAGATTGAATACACCGGCATTGCAGGAAAACTCTCGATCCTTGAAACACCTTGCGGATGAAATGAGTGGTCCATTATCTCCAATGTCACTTCCTGCACCAAAGCAACTCAAATTCACTCCTGGAGTTGTTAATTGGTCAGGCAGGGAGTCAGCTACATTTTTAGATGAAGCACGAAAGATGATACCCATTGGAGAGTTGTCAACGAAGAGGCTAGCAGCTATAGGACAAGCCGGAAAACTTTGGAAGTGGAAGAGAAGTCATCATCAATGGCTGCTACAGTTTAAATGGAAGTGGCAGAAGCCCTGGAAACTCTCAGAATGGATCAAACACAGTGATGAGACAATTATGAGGTCAAGGCCTCGAGCACAAGCTTTGATTAATGTGATATGA 3096 0.4234 MEASEICSVKVALHIRPLIADERQQGCIECVSVTPSKPQVQIGSHAFTFDYVYGNGGSPSVDMFEECVAPLVEGLFQGYNATVLAYGQTGSGKTYTMGTGYNDNCRSGLIPQVMNAFFNKIETLKHQTEFQLRVSFVEILKEEVRDLLDMVSMGKPETSNSNGHSGKVTVPGKSPIQIRETSNGVITLSGITEVPVSTLHDMSSYLEQGSLSRATGSTNMNNQSSRSHAIFTITLQQMRKLHSGSPINDSSDEDMGEEYLSAKLHLVDLAGSERAKRTGSDGVRLKEGIHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEETLNTLKYANRARNIQNKPVVNQDFISNEMQQLRQQLKYLQAELCFQGGVPADEVRVLKERIAWLESTNEDLYRELHEYRSRCAFVGRCEIDEPDGHIYLMKTDGLERRFQSLDSSDHSLVGSLSGEDSRETDEAAKELEHVLFQNTMDKEMNELNKHLEQKESEMKLIAVDTETLKQHFGKKILELEEEKRKVQEERDRLFHEVENLAANSDGLAHKTQDVRGQKLKALEAQILDLKKKQESHVQLLKQKEKSEEAAKRLQTEIQYIKSQKVQLQHKMKQEAEQFRQWKASREKELLQLKKEGRKNEYERHKLEALNQRQKMVLQRKTEEATMATKRLKELLEARKSSPRDNSVYSNGHLQPALVNEKSLQRWLDQEMEVMVHVHEVHAEYGKQNQVQAALEEELALLKQDRFSDGQTIPKGKSKYLRLLSMSPDAKVERIASLENMLCMSSIALKAMASQLTETEEKERTLNNRGRWNQLRSMGDAKNVLQYLFNATAEARCELWEKNMELKDLKEQLKELVALLQQSEAQREELVREQKIKEQAVAIRLNTPALQENSRSLKHLADEMSGPLSPMSLPAPKQLKFTPGVVNWSGRESATFLDEARKMIPIGELSTKRLAAIGQAGKLWKWKRSHHQWLLQFKWKWQKPWKLSEWIKHSDETIMRSRPRAQALINVI* 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0797 1031 SMART kinesin_4 6 375 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso5g0797 1031 Coils Coil 851 899 - -
Gso5g0797 1031 Coils Coil 375 395 - -
Gso5g0797 1031 Coils Coil 407 427 - -
Gso5g0797 1031 CDD KISc_KIF4 7 368 - -
Gso5g0797 1031 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 1030 - -
Gso5g0797 1031 Coils Coil 677 697 - -
Gso5g0797 1031 Pfam Kinesin motor domain 16 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso5g0797 1031 Coils Coil 808 828 - -
Gso5g0797 1031 ProSiteProfiles Kinesin motor domain profile. 8 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso5g0797 1031 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 399 IPR027417 -
Gso5g0797 1031 Coils Coil 579 630 - -
Gso5g0797 1031 Gene3D Kinesin motor domain 2 395 IPR036961 -
Gso5g0797 1031 Coils Coil 497 524 - -
Gso5g0797 1031 MobiDBLite consensus disorder prediction 155 174 - -
Gso5g0797 1031 ProSitePatterns Kinesin motor domain signature. 262 273 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gso5g0797 1031 Coils Coil 529 563 - -
Gso5g0797 1031 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso5g0797 1031 PRINTS Kinesin heavy chain signature 218 235 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso5g0797 1031 PRINTS Kinesin heavy chain signature 263 281 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso5g0797 1031 PRINTS Kinesin heavy chain signature 317 338 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso5g0797 1031 PANTHER KINESIN-LIKE PROTEIN KIN-4B 1 1030 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0797 Gso-Chr5 20071706 20090575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0797 9 391 Calmodulin-binding Proteins AT5G65930 35.142 8.45e-56 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0797 - - gmx:100787957 1989.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0797 5 20071706 20090575 Gso17g1431 17 15690834 15703602 GST