Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0793 ATGGAGATGGCTCAGGTTAAGGCACGAGCTCGAACTGCATTGGCCATGGCCGCTTCCGCAAGTTCACGGAAGAGAAGAAAAATCTCGATCAACAACAACTTCGTTCAAATCAAGAGTTTGAGCAACGCAACCGTGCCGGCGACGGGGGAACGAATCTCCGGGGAATCTCCGGCGTCTTGCTGCTCCAGCAACGGATCCGTCGACGATGAAAACCGAATCATCAAATTCTCAGATCTAGAGGTTGAGAGCACGCGAGTTGTAACGTCGACGTGCGACTGCGGTGAACAACAACAACAAATAAGGAGAGAGATGAGTCTCACGAGCGAGCTTCGAATCACGAATTCTTCTTCGCAAGAGGTGGATTCAGCGGAGGAGCAGATCACCCAAACCAAATCTTTGCCGCCGCAGAAAATGCCGACGGAGTTGGAGCTCGATGAATTCTTCGCCGCTGCTGAGAAAGATATTCGGAAACGCTTCTCAGACAAGTATAATTATGATATTGTGAAGGACGTGTCATTGGAAGGACGATACGAGTGGGTTAAATTGAAGCCATAA 555 0.4955 MEMAQVKARARTALAMAASASSRKRRKISINNNFVQIKSLSNATVPATGERISGESPASCCSSNGSVDDENRIIKFSDLEVESTRVVTSTCDCGEQQQQIRREMSLTSELRITNSSSQEVDSAEEQITQTKSLPPQKMPTELELDEFFAAAEKDIRKRFSDKYNYDIVKDVSLEGRYEWVKLKP* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0793 184 MobiDBLite consensus disorder prediction 113 138 - -
Gso5g0793 184 MobiDBLite consensus disorder prediction 113 136 - -
Gso5g0793 184 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 7 3 184 - -
Gso5g0793 184 Pfam Cyclin-dependent kinase inhibitor 138 182 IPR003175 GO:0004861|GO:0005634|GO:0051726
Gso5g0793 184 PIRSF CKI_KRP_plant 1 184 IPR044275 GO:0004861|GO:0045736|GO:0051726
Gso5g0793 184 Gene3D p27 85 184 IPR044898 -
Gso5g0793 184 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 3 184 IPR044275 GO:0004861|GO:0045736|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0793 Gso-Chr5 19751889 19753902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0793 139 184 Core Cell Cycle Gene Families AT1G49620 67.391 5.87e-18 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0793 - - gmx:547744 322.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0793 5 19751889 19753902 Gso17g1489 17 18552464 18554205 GST
Gso1g1591 1 52602461 52604366 Gso5g0793 5 19751889 19753902 PCT
Gso11g0487 11 4317091 4318924 Gso5g0793 5 19751889 19753902 PCT
Gso5g0793 5 19751889 19753902 Gso1g1591 1 52602461 52604366 PCT
Gso5g0793 5 19751889 19753902 Gso11g0487 11 4317091 4318924 PCT