Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0782 ATGAACTCTAACGGTGCTTATACAGGGCAGGTCACAGTAATAAGTACATCACCTAGTAAAAAGGATGAAGTTGCTAGACAACATCTTGGAGCTGATTCCTTTCTACTAAGCCGTGACCAACATCAGATGCAGGCTGCAATGGGTGCTTTCGATGGTATTATTGACACAGTTTTTGCGGTTCATCCTCTCTTACCTCTCATTGGTTTGCTCAAGTCTCATGGAAAGATTGTAATGGTGGGTGCACCAGAGAAGCCTCTGGAACTTCCAGTCTTTCCTTTACTTGCTGGGAGAAAGATAGTAGTTGGAAGTCTGATTGGAGGGTTAAAGGAGACACAAGAAATGATTGATTTCGCAGCGAAACACAAGAAAGATAGTAGCTGCCCATTGACTTAG 393 0.4326 MNSNGAYTGQVTVISTSPSKKDEVARQHLGADSFLLSRDQHQMQAAMGAFDGIIDTVFAVHPLLPLIGLLKSHGKIVMVGAPEKPLELPVFPLLAGRKIVVGSLIGGLKETQEMIDFAAKHKKDSSCPLT* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0782 130 Pfam Zinc-binding dehydrogenase 6 119 IPR013149 -
Gso5g0782 130 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 6 122 - -
Gso5g0782 130 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 10 122 IPR036291 -
Gso5g0782 130 Gene3D - 9 122 - -
Gso5g0782 130 PANTHER ALDEHYDE REDUCTASE 6 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0782 Gso-Chr5 18203072 18204177 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0782 10 122 Monolignol Biosynthesis Gene Families AT4G37990 69.027 1.58e-40 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0782 - K23232 gmx:100808112 254.603