Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0771 ATGGAAGACACCGCACAACAAATCAAGCGTCCTTTTGGTGTTCCTGAAGGACCAGAATTCACTGTTGGGTTGGATGTACCTTTGAGCGAGTTGAAGGTGGAGCTTCTTAAAGAAGGTGTGTCCATCATTATGCTGACTGGTTTAGGTGGATCAGGAAAAACCACTTTGGCTACAAAGCTTTGTTGGGATGAACAAGTCATAGGTAAATTCAAGGAAAATATTTTATTTGTCACCTTCTCAAAAAAGCCTAAGTTGAAGATTATTGTAGAAAGACTATTTGAACATTGTGGATATCAAGTGCCTGAGTTTCAAAGCGATGAAGATGCAGTCAATCAATTGGGACTTTTGCTGAGGAAAATTGATGCAAGTCCTATGTTGCTGGTCCTGGATGATGTCTGGCCTGGCTCAGAAGCCTTAGTTGAGAAATTTAAAGTTCAGATATCAGATTATAAAATTTTGGTGACTTCAAGAATAGCATTCCATAGATTTGGCACTCCATTCATCTTAAAACCTCTTGTTCACAATGATGCAATAACCCTTTTCCGTCACCACGCTCTCTTAGAAAAAAACAGTTCAAACATTCCCGACGAAGATCTTGTCCAAAAGGTTGTGAGACATTGCAAGGGTTTACCGCTTGCCATTAAAGTGATTGGTAGATCACTAAGTAATCGATCTTATGAGATGTGGCAAAAGATGGTGGAGGAATTTTCACATGGTCATACTATACTTGATTCTAACATTGAATTAATTACTTCCCTCCAAAAGATCTTAGATGTCTTGGAAGATAATCACATCATCAAAGAGTGCTTCATGGACTTAGCTTTATTTCCTGAAGGCCAAAGAATTCCTGTTGCTGCTCTTGTTGATATGTGGGTAGAGTTGTATGGACTAGATAATGATGGCATAGCAACGGCCATTGTCAAAAAATTAGCTTCCATGAATCTGGCTAATGTCTTAGTGACAAGGAAAAATACAAGTGATACAGACAGTTACTATTACAATAACCATTTCATCATTCTCCATGATATTTTAAGAGACTTCGCAATTTATCAAAGCAACCAGGAACAAGTTGAACAGAGAAAAAGACTGATGATTGACATAACAGAAAATAAACCTAAATGGTGGCCCAGAGAAAAACAGCAAGGCTTGATGATCCGCGTACTGTCAAATATTTTTGGATGGCGTGTTGAACAAAAACCCCAACAGATCCCTGCACGGGCATTGTCTATATCGACCGATGAAACTTGCACATCATATTGGTCCCACCTGCAACCAGTTCAAGCTGAGGTTCTGATTTTAAACTTTCAAACTAATCAGTACACCTTTCCAAAGTTCCTGAAAGAAATGAGTAAACTAAAAGTTCTGACAGTCATACATCATGGTTTCCATCCTTCTAAAATGAACAATTTTGAGTTACTTGGCTCATTATCCAACCTAAAACGAATCAGATTAGAGAGGATTTTGGTTCCTCCCTTTGTCACATTGAAGAATCTAAAAAAGTTATCCCTCTTCTTGTGTAATACAAGACAGGCTTTTGAAAATGGAAACATGCTAATTTCAGATGCTTTTCCAAATCTAGAAGATTTGAATATTGACTATTGCAAAGATCTGATAGAATTGCCTAAGGGGGTCTGTGATATCACCTCCCTGAAGATGCTCAGCATTACTAATTGCCATAAGCTTTCTGCATTGCCTCAACAATTTGGAAACTTGGAGAATTTGAAACTTCTAAGGCTAAGTTCCTGTACTGATTTGCAAGAGATACCAAATTCTATTGGAAGACTTTCGAATCTAAGACATATGGACATCTCAAACTGCATTAACCTTCCAAATTTACCAGAGGACTTTGGTAATCTTTGTAATCTAAGAAATCTGTACATGACAAGTTGTCCAAGGTGTGAATTGCCACCCTTAATCATCAATCTTGAGAATTTAAAAGAGGTGGTATGTGATGAAGAGACGGCTGCTTCATGGGAAGCTTTTAAACCTATGCTTCCCAATCTAAAGATAGATGTTCCTCAACTTGATGTTAACTTAAATTGGCTTCATGAAATTCGCTCCTAA 2064 0.3784 MEDTAQQIKRPFGVPEGPEFTVGLDVPLSELKVELLKEGVSIIMLTGLGGSGKTTLATKLCWDEQVIGKFKENILFVTFSKKPKLKIIVERLFEHCGYQVPEFQSDEDAVNQLGLLLRKIDASPMLLVLDDVWPGSEALVEKFKVQISDYKILVTSRIAFHRFGTPFILKPLVHNDAITLFRHHALLEKNSSNIPDEDLVQKVVRHCKGLPLAIKVIGRSLSNRSYEMWQKMVEEFSHGHTILDSNIELITSLQKILDVLEDNHIIKECFMDLALFPEGQRIPVAALVDMWVELYGLDNDGIATAIVKKLASMNLANVLVTRKNTSDTDSYYYNNHFIILHDILRDFAIYQSNQEQVEQRKRLMIDITENKPKWWPREKQQGLMIRVLSNIFGWRVEQKPQQIPARALSISTDETCTSYWSHLQPVQAEVLILNFQTNQYTFPKFLKEMSKLKVLTVIHHGFHPSKMNNFELLGSLSNLKRIRLERILVPPFVTLKNLKKLSLFLCNTRQAFENGNMLISDAFPNLEDLNIDYCKDLIELPKGVCDITSLKMLSITNCHKLSALPQQFGNLENLKLLRLSSCTDLQEIPNSIGRLSNLRHMDISNCINLPNLPEDFGNLCNLRNLYMTSCPRCELPPLIINLENLKEVVCDEETAASWEAFKPMLPNLKIDVPQLDVNLNWLHEIRS* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0771 687 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 19 673 IPR039203 GO:0050832
Gso5g0771 687 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 273 IPR027417 -
Gso5g0771 687 Pfam NB-ARC domain 30 240 IPR002182 GO:0043531
Gso5g0771 687 SUPERFAMILY L domain-like 429 652 - -
Gso5g0771 687 Gene3D - 172 253 IPR042197 -
Gso5g0771 687 Gene3D - 1 162 IPR027417 -
Gso5g0771 687 Gene3D - 254 351 IPR036388 -
Gso5g0771 687 PRINTS Disease resistance protein signature 42 57 - -
Gso5g0771 687 PRINTS Disease resistance protein signature 119 133 - -
Gso5g0771 687 PRINTS Disease resistance protein signature 207 221 - -
Gso5g0771 687 PRINTS Disease resistance protein signature 569 585 - -
Gso5g0771 687 Gene3D Ribonuclease Inhibitor 397 665 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0771 Gso-Chr5 17382363 17387508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0771 523 646 Receptor kinase-like Gene Family AT1G28440 34.646 8.38e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0771 - - gmx:100793054 1372.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0771 5 17382363 17387508 Gso17g1518 17 20243469 20248476 GST
Gso1g1573 1 52382503 52387251 Gso5g0771 5 17382363 17387508 PCT
Gso11g0505 11 4499205 4504151 Gso5g0771 5 17382363 17387508 PCT
Gso5g0771 5 17382363 17387508 Gso1g1573 1 52382503 52387251 PCT
Gso5g0771 5 17382363 17387508 Gso11g0505 11 4499205 4504151 PCT