Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0768 ATGGATCGGGCGGCGTTGACGGTCGGACCGGGCATGGACATGCCGATAATGCACGACAGCGACCGTTACGATCTGGTCCGCGACATCGGGTCCGGAAATTTCGGCGTGGCGAGGCTGATGCAGGATAAACAAACCAAGGAACTCGTCGCCGTCAAGTACATCGAAAGGGGTGATAAGATTGATGAAAATGTGAAGAGGGAAATTATCAATCACAGGTCTCTGAGGCATCCTAACATTGTTAGGTTTAAAGAGGTAATTTTAACACCTACTCATCTTGCTATTGTAATGGAATATGCATCTGGGGGAGAGCTCTTTGAGAAAATCTGCAATGCTGGACGTTTTACTGAGGATGAGGCTCGATTCTTCTTTCAGCAACTCATATCCGGGGTCAGCTATTGCCATGCTATGCAAGTATGTCATCGGGACTTGAAGCTGGAAAACACTTTGCTGGATGGAAGCTCGGCACCTCGTTTAAAGATATGCGATTTTGGGTACTCCAAGTCTTCAGTGCTTCATTCACAACCAAAGTCAACTGTGGGAACTCCTGCATATATTGCTCCAGAAGTATTGTTGAAACAAGAGTATGATGGCAAGCTTGCAGATGTCTGGTCATGTGGAGTAACGTTATATGTGATGCTAGTGGGAGCATATCCTTTTGAAGATCCTAATGAACCAAAGGACTTTCGCAAGACAATTCAGAGAGTTCTTAGTGTCCAGTATTCCATTCCGGACGGTGTTCAAATATCTCCAGAGTGTGGCCACCTTATCTCAAGGATCTTTGTTTTTGACCCAGCAGAGAGAATCACCATGTCTGAAATCTGGAACCATGAATGGTTTCTGAAGAATCTCCCTGCGGACCTGATGGACGAGAAGATAATGAGCAATCAATTTGAAGAGCCAGACCAACCCATGCAGAGCATCGATACGATCATGCAGATAATTTCAGAAGCTACCGTGCCAGCGGCTGGGACCTATTCTTTTGACAAGTTTATGGAGGAGCAAATTTATGACTTAGAATCTGAATCTGATGCTGAATCTGATCTTGATATTGATAGCAGTGGGGAAATAGTGTATGCCATATAG 1083 0.4497 MDRAALTVGPGMDMPIMHDSDRYDLVRDIGSGNFGVARLMQDKQTKELVAVKYIERGDKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFEKICNAGRFTEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSSAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKQEYDGKLADVWSCGVTLYVMLVGAYPFEDPNEPKDFRKTIQRVLSVQYSIPDGVQISPECGHLISRIFVFDPAERITMSEIWNHEWFLKNLPADLMDEKIMSNQFEEPDQPMQSIDTIMQIISEATVPAAGTYSFDKFMEEQIYDLESESDAESDLDIDSSGEIVYAI* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0768 360 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 14 354 - -
Gso5g0768 360 Pfam Protein kinase domain 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g0768 360 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
Gso5g0768 360 ProSiteProfiles Protein kinase domain profile. 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g0768 360 SMART serkin_6 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g0768 360 Gene3D Transferase(Phosphotransferase) domain 1 99 286 - -
Gso5g0768 360 SUPERFAMILY Protein kinase-like (PK-like) 16 317 IPR011009 -
Gso5g0768 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Gso5g0768 360 PANTHER SERINE/THREONINE KINASE 14 354 - -
Gso5g0768 360 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0768 Gso-Chr5 16928002 16933205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0768 22 289 CBL-interacting serine-threonine protein kinases AT4G24400 43.682 5.26e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Gso5g0768 Pkinase 5.6e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0768 K14498 - gmx:100801175 727.628