Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0754 ATGGGTCTCTGCACTTCAAAGCCTCGTGCAAAAAACGCAAACCCCACTAACTCTTCTTCTCTAAATTCCCACACCCACTTCACAGACCCCAATGCCGATGAAAATTTACGAAAAAACCACACTCCCACTCCCAAAAAATCACCCCTTTTCCCGTTCTACACTCCGAGCCCGGCCCACCACCTTTTCTCCGGCAAGTCTCCGGCGCCGGCGAATCCCCGACGGTTCTTCAGGCCGCCGTCGCCGGCGAAGCACATCCGGGCCGTGCTGGCCCGGCGCCACGGCTCGGTGAAGCCCAACGAGGCCACCATCCCGGAAGATGAAGTGGTTACTCTGGACAAGAACTTCGGATTCTCGAAACAGTTCGAGCACAAGTTTGAGGTTGGGGACGAGGTTGGAAGAGGACACTTTGGTTATACTTGTGCTGCAAAGTTGCTTAAGGGTAATCTCAAAGGCCAACACGTCGCTGTCAAAGTCATCCCCAAAGCCAAGATGACCACTGCAATTGCGATTGAGGATGTGAGGAGGGAGGTGAAGATATTGAGGGCTTTGACTGGACATAAGAATCTGATTCAGTTCCATGATGCATATGAGGATAGTGACAATGTCTACATAGTAATGGAGTTGTGCGAAGGAGGAGAGCTTTTGGACAGAATATTGTCGAGAAGTGGGAAATACACGGAGGAAGATGCAAAAGCTGTCATGATACAGATATTGAATGTTGTTGCATTTTGCCATCTACAAGGTGTTGTGCATCGTGATCTTAAACCTGAGAATTTCTTATTCACATCCAAAGATGAGAACTCTTTGCTGAAGGCCATTGACTTTGGATTGTCAGATTTTGTTAAACCAGATGAAAGGCTTAATGATATCGTTGGTAGCGCATACTATGTGGCTCCTGAAGTTCTGCATAGAGCTTACAGCACAGAGGCTGATGTGTGGAGTGTTGGTGTGATTGCATATATTTTACTATGTGGCAGCCGTCCATTTTGGGCGCGGACTGAATCCGGGATCTTTCGTGCTGTGTTGAAAGCTGATCCAAGTTTTGATGAACCACCTTGGCCTTCTCTATCTGATGAGGCAAAGGATTTTGTTAAGAGACTTCTAAATAAAGATCCAAGGAAAAGAATGACTGCAGCACAAGCATTAGGTCATCCATGGATTAAAAATTATAAGGATGTAAAAGTACCCTTGGATATTCTAGTGTTCAAGCTCATGAAGACATACATGCGCTCCTCTTCTCTACGAAAAGAAGCTTTAAGGGCTTTGTCTAAGACATTAGCTATTGAAGAGCTGCAATATTTGAAGGAGCAGTTTGCACTTTTAGAGCCAAACAAAACTAACACTATTAGCTTGGAAAATATCAAAACGGCCTTGATGAAGAATGCAACAGATGCTATGAAGGAATCACGCATTCCTGATTTTCTTGCATCACTTAATGCATTGCAATATAGAAGGATGGCTTTTGATGAGTTCTGTGCAGCTGCACTTAGTGTTCATCAACTTGAAGCACTCGGCCGGTGGGAGCAACATGCACGCTGTGCCTATGAACTTTTTGAAAAGGATGGAAATAGGGCCATAGTCATTGAGGAACTAGCTTCGGAGCTTGGCCTTGGTCCATCTGTTCCTGTTCATGCTGTTCTTCACGACTGGATTAGGCACACTGATGGAAAGTTGAGCTTCCTTGGGTTTGTTAAATTATTGCATGGTCCATCTCGAAGTCTTGCAAAACCTCACTAG 1737 0.4542 MGLCTSKPRAKNANPTNSSSLNSHTHFTDPNADENLRKNHTPTPKKSPLFPFYTPSPAHHLFSGKSPAPANPRRFFRPPSPAKHIRAVLARRHGSVKPNEATIPEDEVVTLDKNFGFSKQFEHKFEVGDEVGRGHFGYTCAAKLLKGNLKGQHVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHKNLIQFHDAYEDSDNVYIVMELCEGGELLDRILSRSGKYTEEDAKAVMIQILNVVAFCHLQGVVHRDLKPENFLFTSKDENSLLKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRAYSTEADVWSVGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEPPWPSLSDEAKDFVKRLLNKDPRKRMTAAQALGHPWIKNYKDVKVPLDILVFKLMKTYMRSSSLRKEALRALSKTLAIEELQYLKEQFALLEPNKTNTISLENIKTALMKNATDAMKESRIPDFLASLNALQYRRMAFDEFCAAALSVHQLEALGRWEQHARCAYELFEKDGNRAIVIEELASELGLGPSVPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLAKPH* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0754 578 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Gso5g0754 578 ProSitePatterns Protein kinases ATP-binding region signature. 131 157 IPR017441 GO:0005524
Gso5g0754 578 Gene3D Transferase(Phosphotransferase) domain 1 214 401 - -
Gso5g0754 578 MobiDBLite consensus disorder prediction 9 29 - -
Gso5g0754 578 SUPERFAMILY Protein kinase-like (PK-like) 123 417 IPR011009 -
Gso5g0754 578 Gene3D - 405 566 - -
Gso5g0754 578 ProSiteProfiles Protein kinase domain profile. 125 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g0754 578 SUPERFAMILY EF-hand 419 568 IPR011992 -
Gso5g0754 578 PANTHER SERINE/THREONINE-PROTEIN KINASE 35 573 - -
Gso5g0754 578 CDD STKc_CAMK 124 386 - -
Gso5g0754 578 SMART serkin_6 125 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g0754 578 Pfam Protein kinase domain 125 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g0754 578 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 35 573 - -
Gso5g0754 578 Gene3D - 427 496 - -
Gso5g0754 578 Gene3D Phosphorylase Kinase; domain 1 118 213 - -
Gso5g0754 578 MobiDBLite consensus disorder prediction 1 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0754 Gso-Chr5 15626578 15631373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0754 1 578 EF-hand Containing Proteins AT3G50530 72.627 0.0 910
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gso5g0754 Pkinase 2.9e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0754 K00924 - gmx:100803313 1150.96