Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0747 ATGGATGGTATTTACCCTATTCGGGTACTAGGGCTTGTGGTAGAATCATTTGTGATTCCAATGCGGGAATTGTTAAATGTTTTTCCAAACACTACTGCCTATCCCTTTGTGATTGAACAAAACAGAAGACAGATAGGGGACGAAGTGGGAGCCGGTGGAGTAGGGCAGAATGAGTTCAATTGTACGATCTTAGGCAAAATCGGTGAAGGCACTTACGACCTCATCTTCCTCGTCCGAACCGAATCCCCTGCTGTCACTCACTCCAAATTTGTTGGCATAAAAAAGTTCAAGCAATCCAAGGACGGCAACGACATCTCCCCCACCGCCATCCGCGAAATCATGTTGCTGAAGAAGATTACACATGAGAACGTCGTTAAGCTCATCAACATACACATCAACCACGTCAACATGTCTCTCTACCTCGCCTTCAATTACGTCGAGCACAATCTCTATGAAATTATTAGGCATCACATGGACAAACTCAACCATTCGATTAATCAATACACTATTAAGTCTTTGCTATGGCAGCTGCTCAATGGACTAAGCTATCTGCATAGTATTGGTTTCCTGAATATAAGAGATACTAACATGCAGGTTGTTGTAACCATTTGGTATCGTGCACCTGAGTTGCTTCTTGGAGCAAAACATTATACCAGTGTTGTTGATATGTGGGCTGTGGGATGCATTTTTGCTCAGTTCTTAACCTTGAAGCCACTATTTCAAGGGGTAGAAGTCAAAGCTACATCAAATCCCTTTCAGCTTGATAAACTTGACAAGATATTTAAGATTTTAGATCATCTCACATTAGAAAAGTGGTCTTCCTTAGCAAGTCTTCCACATTGGCAACAAGATGTGCGACATATACAAGGACACAAATATGACAATGTCGGTCTCTATAATGTTGTGCACCTGTCTCCAAAAAGCCTTGCATATGACCTCTTGTCAAAGATGCTTGAGTAA 960 0.4177 MDGIYPIRVLGLVVESFVIPMRELLNVFPNTTAYPFVIEQNRRQIGDEVGAGGVGQNEFNCTILGKIGEGTYDLIFLVRTESPAVTHSKFVGIKKFKQSKDGNDISPTAIREIMLLKKITHENVVKLINIHINHVNMSLYLAFNYVEHNLYEIIRHHMDKLNHSINQYTIKSLLWQLLNGLSYLHSIGFLNIRDTNMQVVVTIWYRAPELLLGAKHYTSVVDMWAVGCIFAQFLTLKPLFQGVEVKATSNPFQLDKLDKIFKILDHLTLEKWSSLASLPHWQQDVRHIQGHKYDNVGLYNVVHLSPKSLAYDLLSKMLE* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0747 319 PANTHER CELL DIVISION PROTEIN KINASE 61 186 - -
Gso5g0747 319 PANTHER CELL DIVISION PROTEIN KINASE 198 319 - -
Gso5g0747 319 Gene3D Transferase(Phosphotransferase) domain 1 146 190 - -
Gso5g0747 319 Gene3D Phosphorylase Kinase; domain 1 63 145 - -
Gso5g0747 319 Pfam Protein kinase domain 63 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g0747 319 Pfam Protein kinase domain 196 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g0747 319 SMART serkin_6 61 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g0747 319 PANTHER CYCLIN-DEPENDENT KINASE E-1 61 186 - -
Gso5g0747 319 PANTHER CYCLIN-DEPENDENT KINASE E-1 198 319 - -
Gso5g0747 319 Gene3D Transferase(Phosphotransferase) domain 1 197 319 - -
Gso5g0747 319 ProSiteProfiles Protein kinase domain profile. 61 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g0747 319 SUPERFAMILY Protein kinase-like (PK-like) 62 318 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0747 Gso-Chr5 15245578 15249790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0747 63 319 Core Cell Cycle Gene Families AT5G63610 63.014 2.76e-129 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Gso5g0747 Pkinase 1.6e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0747 K02208 - gmx:106798821 627.476