Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0731 ATGAGGTTTCTAACCTTGTTGAATTTAATTACTTTTTTTTTTATTTCAGTTTGTTCATCTTATTTTCCCTTCCACGGATGTGTTTGGGTTGATATTAATCTGATTTGCCTTTCCTTTGTCTCAAAGAAACAGGAATTGCAAATGGGGAAAAAAGGGAGTTGGTTTTCTGCAGTGAAGAAAGTTTTCAGTTCAGATTCCAAAAAAGATAAGAAAAAACAGAAAAGCCACCAGTCAAAGAAAGCAAGCAGTGGCAAGGATGGGGAAGCAGCAGTTGCTCTTCCTCCAATAGAAGATGTTAAATTAATTGAGGCAGAGAAGGAACAGAGCAAGCATGCTGCTTCTTTGGCATTTGCCACTGCTATTGCTGCAGAGGCTGCTGTTGCTGCTGCTCAGGCAGCTGCCAAGGTTGTTCGTCTGACAAGTATGCCACATTATACTGGAAAGACTAAGGAAGAAATTGCAGTCATCAAGATTCAGACCGCATTTCGTGGATATATGGCAAGAAGAGCATTGCGTGCGTTGAGAGGTTTGGTGAGGTTGAAAACATTACAAGGGCAGTCTGTTAAACGGCAAGCTGCTAGCACCCTACGAAGCATGCAAACTCTAGCAAGATTACAATCTCAGATTCGTGAAAGCAGAATTAGAATGTCTGAAGAGAACCAAGCTCTTCAGCACCAACTACCGCAGAAACATGAAAAAGAACTCGAGAAGTTGCGAGCTGCTGTTGGAGAAGAATGGGATGATAGGTCGCAGTTAAAGGAGCAAATTGAAGCAAAATTGTTGCACAGGCAAGAAGCTGCTTTGAGAAGAGAGAGAGCTTTGGCCTATTCATTCTCACATCAGCAAACATGGAAGGGCTCTTCAAAGTCATTAAATCCCACATTTATGGATCCAAACAATCCCAAATGGGGGTGGAGTTGGCTAGAGAGATGGATGGCTACTCGGCCAAGGGATGGCCACAGCACTGTGGTGGATCACAATGATCATGCATCTGTGAAGAGTGCAGCGAGCCGTGCCATGTCTGTAGGGGAAATTACCAAATTGTGCTCTCTCCAAGATAAAAGACCTTCCCCTTTTGGCCAAAAACCAAGAAGACCTGCCCCTCAGAGTTCCCCTTCAAAGACACCATCTACTAATGGAAAGGCAAGGCCATCTAGCTCAAAGGGTAGTAGTGTCTGGGGTGGAGATGAGGGCTCAAGAAGCATGTTTAGTGTTCAGTCGGAGCGCTATCGCCGACACAGCATTGCAGGGTCCTCAGTGAGAGATGATGAGAGCCTTGCAAGCTCACCTGCCATTCCAAGTTACATGGCACCCACAAGCTCTGCAAAGGCCAGGTCCAAAATCATAAGGCCATCACCTGAAAAAGGAGGTGATTCTGTTTTTGCAAGGAAGCGCCTTTCATTCTCTCCTTCTTCTGCTTCAAGAAGGCATTCTGATCCTCCTAAGGTGGAAATGGTTTCCAATAATGATGCTGCTGCCGCAGTTAGCAATGGAAGGGGAAGGTAG 1506 0.4509 MRFLTLLNLITFFFISVCSSYFPFHGCVWVDINLICLSFVSKKQELQMGKKGSWFSAVKKVFSSDSKKDKKKQKSHQSKKASSGKDGEAAVALPPIEDVKLIEAEKEQSKHAASLAFATAIAAEAAVAAAQAAAKVVRLTSMPHYTGKTKEEIAVIKIQTAFRGYMARRALRALRGLVRLKTLQGQSVKRQAASTLRSMQTLARLQSQIRESRIRMSEENQALQHQLPQKHEKELEKLRAAVGEEWDDRSQLKEQIEAKLLHRQEAALRRERALAYSFSHQQTWKGSSKSLNPTFMDPNNPKWGWSWLERWMATRPRDGHSTVVDHNDHASVKSAASRAMSVGEITKLCSLQDKRPSPFGQKPRRPAPQSSPSKTPSTNGKARPSSSKGSSVWGGDEGSRSMFSVQSERYRRHSIAGSSVRDDESLASSPAIPSYMAPTSSAKARSKIIRPSPEKGGDSVFARKRLSFSPSSASRRHSDPPKVEMVSNNDAAAAVSNGRGR* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0731 501 ProSiteProfiles IQ motif profile. 151 179 IPR000048 GO:0005515
Gso5g0731 501 Coils Coil 202 222 - -
Gso5g0731 501 PANTHER IQ-DOMAIN 5-RELATED 48 489 - -
Gso5g0731 501 PANTHER PROTEIN IQ-DOMAIN 1-LIKE 48 489 - -
Gso5g0731 501 Pfam IQ calmodulin-binding motif 154 172 IPR000048 GO:0005515
Gso5g0731 501 MobiDBLite consensus disorder prediction 66 89 - -
Gso5g0731 501 MobiDBLite consensus disorder prediction 349 501 - -
Gso5g0731 501 MobiDBLite consensus disorder prediction 364 394 - -
Gso5g0731 501 SMART iq_5 150 172 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0731 Gso-Chr5 14133465 14139151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0731 48 500 IQD Protein Family AT5G03040 47.239 1.58e-124 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0731 - - gsj:114412345 858.981