Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0727 ATGTTGCAGAAGCAGCTACCTCCCCCCATTGAGGCCTCTTCCGATGAAGAGCAACGACCTTCCTCCAAGCAACACACAGAAGAAGGAGTTTCCTCTTCAGAAGAAGCTTCTTCCCAAGAAGAAGACGACGACGACCAACCTCCCACCCTTCCTCTCGCTTCCGCAAACCCCCACCCGAAACCGTCGTCCTCCGACTCCGACACCGACTTCGAGCCCACCAAAGTAAAACCCAAGCCCACGGACCAGGCCCAGAAGCCCCAGCCCTCACCCGCGCCGCCCAAATGGGGATCCAAGCGCCCTGCCCAGAACAACGCCCCTGCCACTGACCCGAAACGCGCGAAGAAGAAATTGACCAATTCTTCTTCCGCCGCTGCCGCCCACGAGACGGAGGAGAAGTCCGGTGGCGGCCAAGCGAAGTTGTCTCAGAGACTCTTCAGCAAGGAAGACGAACTCGCCATTCTTAAGGGCATGGCTGAGTTCATTTCGAAGACGGGCCAAGACCCTTACAAGTACGCCGATGCCTTCCAAAATTTCGTTAAGAATTCGCTCCGCGTGGAGGCTTCGAGCAACCAGATCAAGGAGAAGATCCGACGGCTGAAGAAGAAGTTTGAAACTAAAGCACAGAGAGCGAAGAAATGGGAGGACCCTGAGTTCTCCAAATTTCACGACCGGACTGTGTTTGAATTATCAAAGAAGGTTTGGGGAGAAGGAGCCAATGGGCTGGTGGAGAAGCCAAAACCTAATAATGGAAAAAGAAAAACTGCCAAGACTCCAAAGAAGGATGCTACTAGCAGGAATGTAGTAGCAAAATCTGAAACTACAACACTACTGGAGTCGATGGAGTTGGAGGAGTGTGGGAATGTAAATTTGCTTTACCGCGAAGTATCTGGTTTCAAAGAACTGAATGAGGATGAGATGAAGAGGGGATTGGCGTTAATTGGAGAATCTAAGAGGAAAGAGTTGGAGGGCAAGTGGAGGAAATTGCGACTTGCTGAGATGGAACTGGTTGCGAATCGCTCACTACTTATTGGGGAGCAGATTAAGTTGATATTTGAAGCACTTCAGTAA 1068 0.5103 MLQKQLPPPIEASSDEEQRPSSKQHTEEGVSSSEEASSQEEDDDDQPPTLPLASANPHPKPSSSDSDTDFEPTKVKPKPTDQAQKPQPSPAPPKWGSKRPAQNNAPATDPKRAKKKLTNSSSAAAAHETEEKSGGGQAKLSQRLFSKEDELAILKGMAEFISKTGQDPYKYADAFQNFVKNSLRVEASSNQIKEKIRRLKKKFETKAQRAKKWEDPEFSKFHDRTVFELSKKVWGEGANGLVEKPKPNNGKRKTAKTPKKDATSRNVVAKSETTTLLESMELEECGNVNLLYREVSGFKELNEDEMKRGLALIGESKRKELEGKWRKLRLAEMELVANRSLLIGEQIKLIFEALQ* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0727 355 MobiDBLite consensus disorder prediction 238 263 - -
Gso5g0727 355 PANTHER STOREKEEPER PROTEIN 11 354 - -
Gso5g0727 355 PANTHER BNAANNG10740D PROTEIN-RELATED 11 354 IPR007592 GO:0006355
Gso5g0727 355 Coils Coil 189 209 - -
Gso5g0727 355 Pfam Protein of unknown function, DUF573 142 235 IPR007592 GO:0006355
Gso5g0727 355 MobiDBLite consensus disorder prediction 246 263 - -
Gso5g0727 355 MobiDBLite consensus disorder prediction 16 30 - -
Gso5g0727 355 MobiDBLite consensus disorder prediction 64 78 - -
Gso5g0727 355 MobiDBLite consensus disorder prediction 1 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0727 Gso-Chr5 13557243 13558904 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0727 94 353 GeBP Transcription Factor Family AT1G61730 32.210 3.49e-29 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Gso5g0727 DUF573 5.6e-29 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0727 - - gsj:114412342 660.603