Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0726 ATGCTCAGTGACATCAGTGTTGATGGCTGCACTGACCTTCACAAGTACTCAGATTATGACTCCAAGTGCTTATATGTCAAATCCAATGCTCACTACAGGTCAAAAGGGTACATAAACTATCTCCAAATCTTTTACTGCAGCTTTGGCCACTCCCCAATTTTGGCTTCAAATTACTTTTGTAATAACCTAGAAGGTCTCTCTTACATCTTAAGATTATCCCCTACCATAGCTGGGGTAACCTTGCTTTCTCTGGGAAATGGTGCCCCTGATTTTTTTGCCAGTGTTGTTTCTTTCACAAGATCCAATGATGGGGCAGTTGGCCTCAATAGCATTCTCGGGGGAGCATTTTTTGTCTCCAGTGCTGTTTTGGGGGTCATAAGTTTCCTTGTTACTTCAAACGAAATTGCAATTGGCAAGGCCAGTTTCATTAGAGATGTCATTTTCTTCCTCTTCTCTCTTTTCATCCTCCTTGTCATCATTTCCATTGGTAAAATTACCTTGTTGGGTTCAATTTCTTATGTTTCTATGTACTTCCTTTATGTCAATGCTATCTCTGCCACATATTTCATCTATGGAGGGGACATGATGTAA 591 0.4044 MLSDISVDGCTDLHKYSDYDSKCLYVKSNAHYRSKGYINYLQIFYCSFGHSPILASNYFCNNLEGLSYILRLSPTIAGVTLLSLGNGAPDFFASVVSFTRSNDGAVGLNSILGGAFFVSSAVLGVISFLVTSNEIAIGKASFIRDVIFFLFSLFILLVIISIGKITLLGSISYVSMYFLYVNAISATYFIYGGDMM* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0726 196 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 6 54 - -
Gso5g0726 196 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 55 191 - -
Gso5g0726 196 PANTHER CATION/CALCIUM EXCHANGER 1 6 54 - -
Gso5g0726 196 PANTHER CATION/CALCIUM EXCHANGER 1 55 191 - -
Gso5g0726 196 Pfam Sodium/calcium exchanger protein 53 181 IPR004837 GO:0016021|GO:0055085
Gso5g0726 196 Gene3D - 72 190 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0726 Gso-Chr5 13292235 13292886 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0726 8 165 Antiporters AT5G17860 53.933 6.38e-54 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0726 K13754 - gmx:113001659 377.867