LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso5g0717	ATGTTAGATACTTTGTGGCAAAGCATGGTTATCTTCTGGGCACCTCTCTTTGCATATTGGAGTAGCACAATTGATGTGGCAAGCATTGGAGACCTTTGGACTTTAGGAGTTGTTATTTTGGTTAATTTACACTTGGCCATGGATGTCATAAGGTGGTATTGGGTGACACATGTTGTCATTAGGGGGTCCATTGTTGCAACTTTCATTAGTGTCATGATCATTGATTCTATCCCCAATCTTCCTGGCTACTTGGCCTTCTTTGATGCTGCAGGAACTGGATTGTTCTGGTTATTGTTGCTTGGAATCATAGTAACAGCATTGCTTCCGTATTTGGTTGTAAAATTTGTTTATCAATACTATTTTCCTAATGATATTCAGATTTGTAGAGAAGCAGAGAAGATTGGGTATGACAGGGTTGTTGAAAGTGGACAGGTAGAAATGCTTCCTATCTCAGATAATCCATCAAGATAA	471	0.3907	MLDTLWQSMVIFWAPLFAYWSSTIDVASIGDLWTLGVVILVNLHLAMDVIRWYWVTHVVIRGSIVATFISVMIIDSIPNLPGYLAFFDAAGTGLFWLLLLGIIVTALLPYLVVKFVYQYYFPNDIQICREAEKIGYDRVVESGQVEMLPISDNPSR*	157

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso5g0717	156	Pfam	Phospholipid-translocating P-type ATPase C-terminal	1	123	IPR032630	-
	Gso5g0717	156	PANTHER	PHOSPHOLIPID-TRANSPORTING ATPASE	1	156	-	-
	Gso5g0717	156	PANTHER	PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE	1	156	-	-

Showing 1 to 3 of 3 entries

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso5g0717	Gso-Chr5	12300716	12302363	Transposed

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso5g0717	1	156	Primary Pumps ATPases	AT5G04930	57.051	7.69e-56	186

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso5g0717	K14802		-	gmx:106798891	315.849

Showing 1 to 1 of 1 entries