Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0717 ATGTTAGATACTTTGTGGCAAAGCATGGTTATCTTCTGGGCACCTCTCTTTGCATATTGGAGTAGCACAATTGATGTGGCAAGCATTGGAGACCTTTGGACTTTAGGAGTTGTTATTTTGGTTAATTTACACTTGGCCATGGATGTCATAAGGTGGTATTGGGTGACACATGTTGTCATTAGGGGGTCCATTGTTGCAACTTTCATTAGTGTCATGATCATTGATTCTATCCCCAATCTTCCTGGCTACTTGGCCTTCTTTGATGCTGCAGGAACTGGATTGTTCTGGTTATTGTTGCTTGGAATCATAGTAACAGCATTGCTTCCGTATTTGGTTGTAAAATTTGTTTATCAATACTATTTTCCTAATGATATTCAGATTTGTAGAGAAGCAGAGAAGATTGGGTATGACAGGGTTGTTGAAAGTGGACAGGTAGAAATGCTTCCTATCTCAGATAATCCATCAAGATAA 471 0.3907 MLDTLWQSMVIFWAPLFAYWSSTIDVASIGDLWTLGVVILVNLHLAMDVIRWYWVTHVVIRGSIVATFISVMIIDSIPNLPGYLAFFDAAGTGLFWLLLLGIIVTALLPYLVVKFVYQYYFPNDIQICREAEKIGYDRVVESGQVEMLPISDNPSR* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0717 156 Pfam Phospholipid-translocating P-type ATPase C-terminal 1 123 IPR032630 -
Gso5g0717 156 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 156 - -
Gso5g0717 156 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0717 Gso-Chr5 12300716 12302363 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0717 1 156 Primary Pumps ATPases AT5G04930 57.051 7.69e-56 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0717 K14802 - gmx:106798891 315.849