Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0702 ATGGGATCTCAAGGTGGGGCAGTGCAAGAGCCAAAGACTACTACTACTACCACTACCCCTTTTGTTAGGCAAGGGCCCTTGTATAATCTGACCCTTGATGAGGTGCATAACCAGCTTGGGAATTTGGGGAAGCCACTTGGCAGCATGAATCTTGATGAGTTGCTGAAGAGTGTGTGGAGTGCTGAAGCTAGTGGTGGTGAGGCCTCTGGCTTGGACTTTGGTGTTGGTGGTGGTGATGCTAACATGCAGCATGGTGAGGCTGCTGCTTTCGGCTCCTCTCTGAATCCTCATGTGAGCCTAACTTTGTCTAGGGATCTTAGCAGGAAAACTGTTCATGAGGTTTGGAGAGATATGCAACTGAAGAAGGTCACTAATAGGGATAAGAAAATCCAGGAAAGGCAAGCTACACTGGGTGAGATGACTCTGGAGGACTTCTTGGTGAAGGCTGGAGTGATTGCTGAAGCTTTGCCTACCACCAAGGACAGGGCCATGTCAGGGGTTGATTCAAATGGGGCTTCCTCACAACATGGTCATTGGTTGCAATACCAGCAGCTCCCTTCTTCGGTGCAGCAGCCGAATGTGATGGGGGGTTATGTGGCAGGCCATGCCATTCAGCAGCCTTTCCAGGTTGGAGTGAATCTGGTTTTGGATGCAGCATACTCTGAGACACCGGCTTCTTTAAAGGGTGCGTTGTCTGATACACAAACTCTGGGTCGAAAAAGGGGTGTCTCTGGTATTGTGGTGGAGAAAACTGTGGAGAGGAGGCAGAAGAGGATGATTAAAAATAGGGAATCTGCTGCTCGGTCACGGGCAAGAAGACAGGCATACACACAAGAACTGGAGATTAAAGTTTCACGATTAGAAGAGGAGAATGAAAGGCTTAGAAGACTGAATGAGATGGAGAGGGCATTGCCATCAGTTCCACCACCTGAGCCTAAGCCTAAGCATCAGCTTCGCAGAACTAGTTCAGCCATCTTTTGA 981 0.4913 MGSQGGAVQEPKTTTTTTTPFVRQGPLYNLTLDEVHNQLGNLGKPLGSMNLDELLKSVWSAEASGGEASGLDFGVGGGDANMQHGEAAAFGSSLNPHVSLTLSRDLSRKTVHEVWRDMQLKKVTNRDKKIQERQATLGEMTLEDFLVKAGVIAEALPTTKDRAMSGVDSNGASSQHGHWLQYQQLPSSVQQPNVMGGYVAGHAIQQPFQVGVNLVLDAAYSETPASLKGALSDTQTLGRKRGVSGIVVEKTVERRQKRMIKNRESAARSRARRQAYTQELEIKVSRLEEENERLRRLNEMERALPSVPPPEPKPKHQLRRTSSAIF* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0702 326 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 257 272 IPR004827 GO:0003700|GO:0006355
Gso5g0702 326 PANTHER BZIP TRANSCRIPTION FACTOR 2 324 - -
Gso5g0702 326 Pfam bZIP transcription factor 254 297 IPR004827 GO:0003700|GO:0006355
Gso5g0702 326 MobiDBLite consensus disorder prediction 1 21 - -
Gso5g0702 326 Gene3D - 252 304 - -
Gso5g0702 326 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 252 296 IPR004827 GO:0003700|GO:0006355
Gso5g0702 326 SUPERFAMILY Leucine zipper domain 254 300 IPR046347 GO:0003700|GO:0006355
Gso5g0702 326 Coils Coil 273 304 - -
Gso5g0702 326 SMART brlzneu 250 320 IPR004827 GO:0003700|GO:0006355
Gso5g0702 326 MobiDBLite consensus disorder prediction 297 326 - -
Gso5g0702 326 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 324 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0702 Gso-Chr5 11433901 11438853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0702 1 326 bZIP Transcription Factor Family AT3G56850 52.553 3.10e-92 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso5g0702 bZIP_1 1e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0702 K14432 - gmx:100816805 612.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0702 5 11433901 11438853 Gso19g1034 19 38001614 38006498 GST