Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0676 ATGGAGGAAGCGAAGGAAAAGTGTTGGAGGATGGAAGTGGAGGAGAAGCTGAAGAGGCTGCAATCTCTTCTCTTCGGCGCAGAGCGCGCTCTCGAGAACAACGACTTCTCCTCGGCTTACATCCTCGCGCTTCGTCTCCTCGGATTCCTCGACGTGAATTCCCACTCCAACGTCGACGAAGCCTTCGTCCAACCGATTCGCCGCGACGCTCTCGCCAAACTCCACTTCGCTCGCCAATCCCTCACTCCTCAATCTGATCGCCAAGCTTTTGAACAAGCAAAGAAATCTCCAGGACGCATTTTTGGCACAACAGGAGATATTGACATTGAGAAGATTCGGAATTCAAAGTACTTCCAAGCTCTTGTCAAGCAATCTAAAGAAAAGGATGAGAATCAATTGGTTGATCACCTGGGGAAACAGGACAAAGCGGGCAGCAAAGCCTCAAAGCAAATGGTGCAAACTAAGTTACCATCCATGTATGGGAAAAGAAGCTTGAGGACTAGCAATGGTTCCAAGAGTATTTTTAACATGAAAAATAATAGCTCTGAGGACTGCATGAGTCTTGATAGGCCTCAATCTCATGCCAGCCATACAAAGGGTCCAGGTTTCTCTTCTATCTTGCAAGTTGAAGGAGAAGAAAGAGCTTTTGGAAACACATTCTCCACAAAACGTGTACACATGGAAAACAATAGCCCCAGAGTTGGATTTGTGAAGTCACCTTCAAGTAAGGAGGATGTTAACCCTGATGCTTGTGGTAACGGGTTTGTTACTGCTAGAGCAAAGCTGGAAATGGAAGCAAAGCAGAAGCGAGGAGTAGGCGGTTCACCCAGTGCCTCTGTCTCACCACAATGTGATAACAATTCTGCCAACAGGCTGTATGGTGGAAGATCATACGGTGTTCCACGACGTGGCGTCCGTGGTAATTTTGTTCCCCCGATTAAATCCAATGGGAACAATGCTGGAAATACAAGCACACGCATTGCTGGAAAATGTGATGATTCTTTAGATGACTCTACAAAGAAATGTCTGGAAATCCTATGTGGTCCTGATGGTGAGCTTCCTGAGAAATTGAGGAATTTGGATCCTCGCCTCATTGAACATGTTAGTAACGAGATTATGGACAGAGATCCCAATGTCCGGTGGGATGATATAGCTGGATTGGAGCATGCCAAGAAATGTGTCAATGAGATGGTCGTATATCCTCTGCAACGTCCTGACATATTCATGGGCTGTCGTTCCCCTGGGAGGGGTCTGCTTCTGTTTGGTCCCCCAGGAACTGGTAAAACAATGATAGGTAAAGCCATAGCAGGGGAGGCGAAGGCAACCTTCTTTTACATATCCGCAAGTTCTTTGACTAGCAAGTGGATTGGTGAAGGTGAAAAGCTTGTAAGAGCCCTTTTTGGAGTTGCCAGTTGTCGTCAGCCAGCAGTAATTTTTGTTGATGAAATAGATTCGCTCCTGTCTCAGCGTAAATCAGACGGTGAGCATGAATCAAGTAGACGGCTAAAGACACAGTTTCTCATTGAAATGGAAGGCTTTGACAGTGGTAGCGAGCAAATTTTGCTTATAGGGGCAACAAATCGTCCCCAAGAGCTTGATGAAGCAGCACGAAGGAGACTTACTAAACGACTTTATATTCCCCTACCTTGCTCAGAGGCAAGAGCTTGGATTATACGTAACCTTCTAGAGAAAGATGGATTATTCAAGCTATCATGCGACGAAATGGATATCATATGCAAATTTACGGAAGGTTATTCAGGATCAGACATGAAAAACTTAGTGAAGGATGCTTCTATGGGACCCCTAAGAGAGGCTTTAAGTCAAGGTATAGAAATTACAAAGTTGAAAAAGGAGGATATGCGACCTGTAACTCTTCAGGATTTCAAGAATTCCCTCCAAGAGGTGAGGCCTTCTGTTTCCACAAATGAACTTGGCACTTATGAACAATGGAACAAGCAATTTGGAAGCCTATCACTGTAG 1980 0.452 MEEAKEKCWRMEVEEKLKRLQSLLFGAERALENNDFSSAYILALRLLGFLDVNSHSNVDEAFVQPIRRDALAKLHFARQSLTPQSDRQAFEQAKKSPGRIFGTTGDIDIEKIRNSKYFQALVKQSKEKDENQLVDHLGKQDKAGSKASKQMVQTKLPSMYGKRSLRTSNGSKSIFNMKNNSSEDCMSLDRPQSHASHTKGPGFSSILQVEGEERAFGNTFSTKRVHMENNSPRVGFVKSPSSKEDVNPDACGNGFVTARAKLEMEAKQKRGVGGSPSASVSPQCDNNSANRLYGGRSYGVPRRGVRGNFVPPIKSNGNNAGNTSTRIAGKCDDSLDDSTKKCLEILCGPDGELPEKLRNLDPRLIEHVSNEIMDRDPNVRWDDIAGLEHAKKCVNEMVVYPLQRPDIFMGCRSPGRGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSDGEHESSRRLKTQFLIEMEGFDSGSEQILLIGATNRPQELDEAARRRLTKRLYIPLPCSEARAWIIRNLLEKDGLFKLSCDEMDIICKFTEGYSGSDMKNLVKDASMGPLREALSQGIEITKLKKEDMRPVTLQDFKNSLQEVRPSVSTNELGTYEQWNKQFGSLSL* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0676 659 MobiDBLite consensus disorder prediction 274 293 - -
Gso5g0676 659 PANTHER FIDGETIN-LIKE PROTEIN 1 69 656 - -
Gso5g0676 659 SMART AAA_5 414 550 IPR003593 -
Gso5g0676 659 MobiDBLite consensus disorder prediction 137 203 - -
Gso5g0676 659 Pfam ATPase family associated with various cellular activities (AAA) 418 548 IPR003959 GO:0005524|GO:0016887
Gso5g0676 659 MobiDBLite consensus disorder prediction 146 203 - -
Gso5g0676 659 PANTHER AAA DOMAIN-CONTAINING 69 656 - -
Gso5g0676 659 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 377 654 IPR027417 -
Gso5g0676 659 ProSitePatterns AAA-protein family signature. 520 539 IPR003960 GO:0005524|GO:0016887
Gso5g0676 659 MobiDBLite consensus disorder prediction 231 250 - -
Gso5g0676 659 Gene3D - 377 651 IPR027417 -
Gso5g0676 659 Pfam Vps4 C terminal oligomerisation domain 621 655 IPR015415 -
Gso5g0676 659 Gene3D - 549 635 - -
Gso5g0676 659 Coils Coil 10 30 - -
Gso5g0676 659 CDD AAA 411 548 - -
Gso5g0676 659 MobiDBLite consensus disorder prediction 270 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0676 Gso-Chr5 10432464 10439331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0676 355 657 Calmodulin-binding Proteins AT3G56690 32.372 1.08e-40 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0676 K22766 - gmx:100776024 1295.03