Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0658 ATGATGTTCCTAGCTGGTTCAATGAGACATTTTTGTTACCATTATCTTGTGGTTCTTTCATGGCTTTTGTTCATCCCAAACTCTCATGAATTACAAGCAGCTCAGACTCAAGCCTTGTTGCAGTTAAGAGTTTATCTCGAGTACCCTTCTTCTCTGCAAATTTGGGAAAATTACAATTGGGACCTATGCAGCATTTCACCCTCTGCAAACCTGAGCATTAAATGTGAAAATAATGAGATAACTGAGCTTAAAATTATGGGAGAAAAGTCTGAGAAGCCGCAACGGTTCAATGGATTTGCTGTTCCTAATCAGACTCTATCCATGAATTTCTCCATTGTTTCCTTTCTCTCCACTTTGACAAGGTTGGCCAGCTTAAGGGTTCTCAGCTTGGTGTCCTTGGGGATTTGGGGGCCACTTCCTGATAAGATTCACCATTTCTCTTCGCTTCAAGTTTTGGACTTGAGCTCTAATTTCATATTTGGAGCCATCCCACCAAAAATATCCACAATGGTAAAGCTTCATGCATTGACCCTTGATGACAATTATTTGAACACCACTATGCCTGATTGGTTTGATTCCTTGTCTAATCTAAATATCTTGAGTGTGAAGAGCAATGGTATAAAGGGTCCATTCCCCTCCTCACTGTGCAAAATTAAGACACTTGAAGTGATTTCCTTGTCCCACAATGAGCTGGCTGGGGAATTACCTGATCTGGGTTCTCTCACTGGCCTACATGTTCTGGATTTAAGAGAAAACCAATTAGAATCTGAACTACCATTGTTGCCTAAATCAGTGGTCACAGTTCTGCTTAGCAATAACTCATTCTCAGGAGAGGTACCTAAGCAGTTTGGTGAATTAGATCAGCTTCAACATCTAGATCTGTCTTCAAATCACCTCAGTAAGACACCCCCATCTACCTTGTTTTCTCTGCCCAAAATAAGTTATTTGAATCTGGCAAGCAATGCACTAAGTGGGGCCCTCCCAGACAAACTTAGCTGTGGGAGCAAACTTGGGTTTGTGGACATTTCTAGTAACAAGTTAAGTGGTGGACTTCCCTCTTGCTTGGCAAATACTTCTGATGGTAGAGTTGTCAGGTATGCTGGAAACTGTTTATCTGTTGATTCTCAGAACCAGCATAGAGGGTCTTATTGTAGAGAATCTAGCTCTGGATGGAAGAACTTGAAGACATGGAAAGTAGCTGCAGCAATGGCCATCATTGTTGGACTTGTTCTTGTGGTTATGGTTTCAGGAGTCTTTTTATGGAAAAAATATCATTCCAGAAAGATAACTGGGCAGGAAGTGTTGCTAAAAATTGTTCATGATAACTCCACAACTGGGGTTTCATCAGAGATCCTTGCAAATGCCAGATTCATTTCTCAAACAGTGAAGCTAGGGACACAAACTACTTCAACCTGTCGACAATTTTCAATAGAGGAATTGAAGGAAGCCACAAAAAACTTTGACTTGTCAACTTATATTGGTCAAGGTCAAGGCTCCATAGGAAAGCTGTTCAAAGGTAAACTAGAGAATGGATCCTACGCGGCGATACGATCTTTGGCTCTGTCAAAGAAATGCTCAATTCAAAATCTTAGAGCTAAATTGGATTTACTCTCAAAACTTCAACATCCAAATTTGGTTAGCCTTTTGGGCCATTGTATTGATGGTGGTGGACAAGAAGATCCCAATTCCCACAAGCTTCATCTTGTATATGAGTATGTGCCAAATGGGAATTATCGTACACATCTGTCAGAATTTTCTGTAGATAAGGCACTTAAGTGGTCTGATAGATTGGCAATTTTAATTGGCGTTGCAAAGGCAGTGCATTTCTTACATACTGGTGTTATACCTGGCTGTTTTAGTAACCAGCTAAAGACAAAGAATGTCTTACTTGATGAACACCGCATTCCAAAACTGAGTGACTATGGCATGTCCATCATCACAGAAGAAATTGAAAAATCTGAGGCAAAGAGTGAGAAACCAAAACCACGCCCAAGGACCAAAGCGGAGGATGATGTTTATAATTTTGGATTCATATTGTTTGAATCACTTGTTGGACCCATAGCATGCGACAAAGGTGAAACATTTTTTCTAAATGAAAAGGCATCCTTTGGCAGTCAAGATGGTCGAAGAAAGATTGTGGATCCTATTGTGTTGACCACTTGCTCTCAAGAGTCATTATCAATTGCAATCTCAATAACAACCAAATGCATATCTCCAGAATCTTCATTCCGTCCCTCTTTTGAGGATGTCCTATGGAACTTACAGTATGCAGCTCAAGTCCAAGCCACAGCAGATGCAGACCACAAATCAGATTAA 2316 0.405 MMFLAGSMRHFCYHYLVVLSWLLFIPNSHELQAAQTQALLQLRVYLEYPSSLQIWENYNWDLCSISPSANLSIKCENNEITELKIMGEKSEKPQRFNGFAVPNQTLSMNFSIVSFLSTLTRLASLRVLSLVSLGIWGPLPDKIHHFSSLQVLDLSSNFIFGAIPPKISTMVKLHALTLDDNYLNTTMPDWFDSLSNLNILSVKSNGIKGPFPSSLCKIKTLEVISLSHNELAGELPDLGSLTGLHVLDLRENQLESELPLLPKSVVTVLLSNNSFSGEVPKQFGELDQLQHLDLSSNHLSKTPPSTLFSLPKISYLNLASNALSGALPDKLSCGSKLGFVDISSNKLSGGLPSCLANTSDGRVVRYAGNCLSVDSQNQHRGSYCRESSSGWKNLKTWKVAAAMAIIVGLVLVVMVSGVFLWKKYHSRKITGQEVLLKIVHDNSTTGVSSEILANARFISQTVKLGTQTTSTCRQFSIEELKEATKNFDLSTYIGQGQGSIGKLFKGKLENGSYAAIRSLALSKKCSIQNLRAKLDLLSKLQHPNLVSLLGHCIDGGGQEDPNSHKLHLVYEYVPNGNYRTHLSEFSVDKALKWSDRLAILIGVAKAVHFLHTGVIPGCFSNQLKTKNVLLDEHRIPKLSDYGMSIITEEIEKSEAKSEKPKPRPRTKAEDDVYNFGFILFESLVGPIACDKGETFFLNEKASFGSQDGRRKIVDPIVLTTCSQESLSIAISITTKCISPESSFRPSFEDVLWNLQYAAQVQATADADHKSD* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0658 771 Gene3D Ribonuclease Inhibitor 32 265 IPR032675 -
Gso5g0658 771 SUPERFAMILY Protein kinase-like (PK-like) 467 754 IPR011009 -
Gso5g0658 771 SUPERFAMILY L domain-like 119 372 - -
Gso5g0658 771 Pfam Leucine rich repeat 266 323 IPR001611 GO:0005515
Gso5g0658 771 Pfam Leucine rich repeat 172 231 IPR001611 GO:0005515
Gso5g0658 771 ProSiteProfiles Leucine-rich repeat profile. 288 309 IPR001611 GO:0005515
Gso5g0658 771 Gene3D Ribonuclease Inhibitor 266 390 IPR032675 -
Gso5g0658 771 PANTHER INACTIVE LRR RECEPTOR-LIKE KINASE 6 771 - -
Gso5g0658 771 PANTHER OS07G0166700 PROTEIN 6 771 IPR045272 GO:0004714|GO:0006468
Gso5g0658 771 Pfam Protein tyrosine and serine/threonine kinase 496 750 IPR001245 GO:0004672|GO:0006468
Gso5g0658 771 Gene3D Phosphorylase Kinase; domain 1 447 572 - -
Gso5g0658 771 ProSiteProfiles Protein kinase domain profile. 489 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g0658 771 SMART LRR_typ_2 310 334 IPR003591 -
Gso5g0658 771 SMART LRR_typ_2 146 170 IPR003591 -
Gso5g0658 771 SMART LRR_typ_2 241 264 IPR003591 -
Gso5g0658 771 SMART LRR_typ_2 286 309 IPR003591 -
Gso5g0658 771 Gene3D Transferase(Phosphotransferase) domain 1 573 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0658 Gso-Chr5 9496567 9503393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0658 16 702 Miscellaneous Gene Families AT5G14210 56.671 0.0 769
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Gso5g0658 PK_Tyr_Ser-Thr 1.2e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0658 - - gmx:100780663 1457.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0658 5 9496567 9503393 Gso19g0979 19 37076166 37082265 GST