Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0650 ATGTCGTCGTCGGCGGTCCTCGCTGGAATCTTTTGTAGGAAGCCTCTCTATGACAAGGCCATCGTTGTAATCATGTGTTTTGCGGTGGGGGTGATACTTTTGACCTCACTGGTCCACGTGCTCCTCGACTCGTACGCTGCACTCGCCAATGCCATGTGGCGTCGCACCACCCCTGGAGGGACTTCCCCCTCGCGGGCCTCGTCATGCTCTATGTCTAGGACTGGGAGTGGGAATGGATCAGATTCATCAAATGCCAATACAGGCACATCCACAGGTGCAGCAAGTAGAAGCAAAAATGCTCCAGGAAATAAGACTGATATTGGGTGGAAGCATGGGACAGATGTTTTAGGGAATGGTAAAAAAGTTAAGTGCAACTACTGCTCAAAGATCAACAATGGGGGAATTTTTAGATTTGAGCATCATCTTGCTGGGACTAGATGGAATTTTGAACATTGTGCTTCAGTTCCTGAAGAAGTTAAGATGCTTATGATGAACGTTGTTGCAGAGGTTGCTAATGCATCAGAGAAGAGAAGAAAGTTGAACAGTATTCATGAAGAAGGTACTGAGGGAGTGGAAGTGGAGTCAAATAGTAGTCAAAGTGGAATACAACGAAAAGGGATGCTTACTTTCAAAGGAAGAGGAAAAGCAAAATTTGTTCAGGCTAGTGGTGGTGAGGGAGCTCAAGCAACTTTAAATCAGTTATATAAAAAAGGTGACAAAGATAAAGTTGATGATCAATGTGCTGAATTTTGGTACACAAGTGCCATTCCATTCAATGTTATTAAAAATCCAACTTTTGCAAAATTTTGTGACATGGTTGGGAGATATGGGGTTGGCTATAAACCTCCATCATATCATGATATCAAAGAGAAGCTTTTGAAAAGAGCAGTGACCAAAACTGATGTAATGCTTCAAGAATTTAGGGATGAGTGGAAGAAAACTGGTTGCTCAATTATGTCTGATGGGTGGACCGATAAAAAAAGACGTTCAATTTGTAATTTTTTGGTGAACAGTCCAAAAGGGACTGTATTTCTTTATTCATTGGATACCTCAGACATCTCAAAAACAGCTGACAAAGTGTTGAAGATGTTGGATGATGTAGTGGATTTTGTTGGAGAGGAGAATGTAGTGCAGGTGATAACTGATAATGCTGCAAATTACAAAGCAGCTGGAGAATTATTGATGCATAAACGAGAGAATTTGTATTGGACCCCATGTGCTGCTCATTGCATTGATTTAATATTTGAAGATTTTGAGAAACATTTGAAGGTTCATCAGACTACTATAACAAAGGGAAGAAGGATCACCACCTACATTTATGGTAGAACAATGTTGATTAGCATCATGAAGAAGTTCACAAATGGAAGAGACTTGATTAGGCCTGGTATGACTAGATTTGCCACAGCTTATTTAACTTTAGCTTGCCTTCATGAATTGAAAGCATCATTAATGAGCATGTTTAGCTCTGAAGAGTGGAAAACAAGCAAGTTTGGAACTTCACAAGAGGGAAGAAAAGTACAGAATATGGCTTTGGATAGTCGATTTTGGAAGAACGTAACCATGTGCCTCAAAGTTGCTGCCCCTCTTATGGTGGTCCTTCGATTGGTGGATTCAGATGTAAAACCCGCCATGGGTTTCATATATGAGGAGATGGAAAATGCAAAAGAGAAGATAAAATGCAACTTTAATAACACTAAGAAAAGCTATGAGCCTGTTTGGAAAATTATTGATGAGAGGTGGGATCATCAGCTTCACAGGCCTTTTCATGCAGCTGCATATTATCTTAATTCTCACCTGCACTATGAACCTACTTTCAGACATGATGACCTTCAGGTGAAAGAAGGGTTGCACACATGTATGAGAAGATTGGTCAAGGATGTTGCAGAAAGGAAAAAAATTAATTTGCAACTTGTTGAGTTTCATTTTGCTAGAGGGCTTTTCTCTATGGAAGAGGCAAAGGACAGTAGAAAAATCATGCAACCTGGAGAATGGTGGGAGATGTTTGGTGATGGAACTCCAGAGTTGAGGAGATTTGCTATTCGTGTTTTGAGCTTGACTTGTAGCTCTTCTGGGTGTGAGTGTAATTGGAGCTCATTTGAAATGTTAAAAAGTAAACAAAATAGAAAAAGTATTGCTCTTCCATTTGATGAGATTGAATCTGACAATGAATGGATAACTGAAGAGGGATATAATGATGAGGATGAGCAACCTCAAGCTGAAGGTCATGGTGACAATGTTGAATTAGTGGGAGATGTTGGAGGAAGTTCAAATGATCCAGTTGTAGATGCTTTTGATCTAGATAATTTAATTTTCTTGGAACCTAATGATGATGATAAACAGTCTGAGGAAGACCTTGATGATGATGGAGATGGTGATGAAAGTGATGATATTCATGGAGATGATCCAATTAGAGGATTGGACATGCTTCTTTGA 2433 0.3991 MSSSAVLAGIFCRKPLYDKAIVVIMCFAVGVILLTSLVHVLLDSYAALANAMWRRTTPGGTSPSRASSCSMSRTGSGNGSDSSNANTGTSTGAASRSKNAPGNKTDIGWKHGTDVLGNGKKVKCNYCSKINNGGIFRFEHHLAGTRWNFEHCASVPEEVKMLMMNVVAEVANASEKRRKLNSIHEEGTEGVEVESNSSQSGIQRKGMLTFKGRGKAKFVQASGGEGAQATLNQLYKKGDKDKVDDQCAEFWYTSAIPFNVIKNPTFAKFCDMVGRYGVGYKPPSYHDIKEKLLKRAVTKTDVMLQEFRDEWKKTGCSIMSDGWTDKKRRSICNFLVNSPKGTVFLYSLDTSDISKTADKVLKMLDDVVDFVGEENVVQVITDNAANYKAAGELLMHKRENLYWTPCAAHCIDLIFEDFEKHLKVHQTTITKGRRITTYIYGRTMLISIMKKFTNGRDLIRPGMTRFATAYLTLACLHELKASLMSMFSSEEWKTSKFGTSQEGRKVQNMALDSRFWKNVTMCLKVAAPLMVVLRLVDSDVKPAMGFIYEEMENAKEKIKCNFNNTKKSYEPVWKIIDERWDHQLHRPFHAAAYYLNSHLHYEPTFRHDDLQVKEGLHTCMRRLVKDVAERKKINLQLVEFHFARGLFSMEEAKDSRKIMQPGEWWEMFGDGTPELRRFAIRVLSLTCSSSGCECNWSSFEMLKSKQNRKSIALPFDEIESDNEWITEEGYNDEDEQPQAEGHGDNVELVGDVGGSSNDPVVDAFDLDNLIFLEPNDDDKQSEEDLDDDGDGDESDDIHGDDPIRGLDMLL* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0650 810 MobiDBLite consensus disorder prediction 57 102 - -
Gso5g0650 810 Pfam hAT family C-terminal dimerisation region 654 704 IPR008906 GO:0046983
Gso5g0650 810 MobiDBLite consensus disorder prediction 733 810 - -
Gso5g0650 810 ProSiteProfiles Zinc finger BED-type profile. 103 159 IPR003656 GO:0003677
Gso5g0650 810 PANTHER OS09G0499600 PROTEIN 122 707 - -
Gso5g0650 810 Coils Coil 548 568 - -
Gso5g0650 810 MobiDBLite consensus disorder prediction 777 796 - -
Gso5g0650 810 SUPERFAMILY Ribonuclease H-like 308 708 IPR012337 -
Gso5g0650 810 PANTHER OSJNBA0013A04.12 PROTEIN 122 707 - -
Gso5g0650 810 MobiDBLite consensus disorder prediction 57 111 - -
Gso5g0650 810 Pfam Protein of unknown function (DUF 659) 283 435 IPR007021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0650 Gso-Chr5 8852859 8861837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0650 6 50 Inorganic Solute Cotransporters AT2G30080 64.444 1.43e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0650 - - gmx:102667960 1247.26