Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0619 ATGAGATTATTCCTTGCAAACTGCATGCATGAGATACTTTTAATTTCTTTGGTTGTTTTGGAGGTGGATCACAAAGAGTATGTTAGAAAGCCAGAAAATCGTTTTGTGAGTGCATATGGTCATGTTTTTTCTGTGCAGCTTCACAAAGAGTATGTTAGAAAGCCAGAAAATCGTTTTGTGAGATTTTTTCTGTGGCTTGCTACTGCAGTTGGAGCTTTAGAAGTGGTTTGCTTTTTGATAATTTGGGTTTTTTTGATTAAGACGCGTCAAAAGTCTGGTGCAGATCAACAAGGCTACCATCAAGCAGAAATGTGGTTCAGAAAATATAGTTATTCTGAATTGAAGGAGGTGACTAAAGGGTTCAACCAAGAGATTTCAAGGGGTGCAGAAGGGATTGTGTACAAAGGCATTTTATCAGATCAAAGACATGTAGCAATTAAGAGACTCTATGAAGCCAAACAAGGAGAAGAGGAATTCCTTGCTGAAGTGAGCAGCATTGGAAGGCTCAATCACATGAACTTGATTGAAATGTGGGGATATTGTGCTGAGGGAAAGCATAGGTTGTTGGTGTATGAGTATATGGAGAATGGTTCTTTGGCACAAAATCTCTCATCCAACACACTTGATTGGAGTAAGAGATATAACATTGCTCTTGGAACGGCACGAGTTTTAGCATATCTGCATGAAGAATGCTTGGAGTGGATACTGCACTGTGATATAAAGCCTCAAAACATACTTCTTGATGCTAATTATCAGCCCAAGGTAGCAGATTTTGGGTTGTCCAAGCTACTAAACAGAAATAACCTCAACAACAATTTAAGGTTTTCAGTGATCAGAGGAACTCGAGGATATATGGCACCGGAGTGGGTATACAACACACCAATCACCTCCAAAGTAGATGTTTACTGCTATGAAATTGTTCTATTGGAGATGATAACTGGGAAAAACCCAACAACTGGTGTCCATAGCAATGCTGGAGAAGAATCATATAATGGAAGGCTGGTAACATGGGTTAGAGAGAAAAGGGGTGACGCATCTTGGCTAGAGCACATCATTGATCCTGCCATTAAAACAAATTTCGATGAATGTAAGATGGACCTCTTGGCTAGAGTGGCTTTGGATTGTGTTGAGGTAAATAAGGATCGGAGACCCACCATGAGCCAAGTAGTAGAAATGCTTCAAAGCCATGATTGTTTAAGGTGTTGA 1206 0.3988 MRLFLANCMHEILLISLVVLEVDHKEYVRKPENRFVSAYGHVFSVQLHKEYVRKPENRFVRFFLWLATAVGALEVVCFLIIWVFLIKTRQKSGADQQGYHQAEMWFRKYSYSELKEVTKGFNQEISRGAEGIVYKGILSDQRHVAIKRLYEAKQGEEEFLAEVSSIGRLNHMNLIEMWGYCAEGKHRLLVYEYMENGSLAQNLSSNTLDWSKRYNIALGTARVLAYLHEECLEWILHCDIKPQNILLDANYQPKVADFGLSKLLNRNNLNNNLRFSVIRGTRGYMAPEWVYNTPITSKVDVYCYEIVLLEMITGKNPTTGVHSNAGEESYNGRLVTWVREKRGDASWLEHIIDPAIKTNFDECKMDLLARVALDCVEVNKDRRPTMSQVVEMLQSHDCLRC* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0619 401 Gene3D Phosphorylase Kinase; domain 1 84 193 - -
Gso5g0619 401 CDD STKc_IRAK 125 394 - -
Gso5g0619 401 ProSiteProfiles Protein kinase domain profile. 119 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g0619 401 SMART serkin_6 119 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g0619 401 Gene3D Transferase(Phosphotransferase) domain 1 194 399 - -
Gso5g0619 401 SUPERFAMILY Protein kinase-like (PK-like) 97 393 IPR011009 -
Gso5g0619 401 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 20 398 - -
Gso5g0619 401 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 20 398 - -
Gso5g0619 401 Pfam Protein kinase domain 123 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g0619 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0619 Gso-Chr5 7654819 7667808 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0619 42 395 Trihelix Transcription Factor Family AT5G38560 37.802 1.32e-66 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gso5g0619 Pkinase 3.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0619 - - gmx:100815234 797.734