Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0615 ATGGGTTGCTTACACTCCAAAACCGCACATCTTCACTCCCCTGAAGACCCTCCTACTGCCTTACCAGACTCCAAAAAACCCGATCCAGGGAATGGTGGTGATGATGTTGATCAAGAGTGTCAGGTTCCAGCATTCAAAGAGTATGGCCTGATTGAGCTTAGAAGGGCCACAAATGAGTTCAGCACAGATTACATTGTTTCTGAGAGTGGTGAGAAAGCTCCCAATGTGGTCTACAGAGGGAAGCTTGAGAACAATCGATTAGTTGCTGTGAAACGCTTCTCCAAACTCTCTTGGCCTGATGCTCAACAGTTCATGGCAGAGGCAGCTGGAGTTGGGAAAGTGAGGCACAAGAGACTGGTGAATCTAATTGGTTGTTGTGCTGAAGGAGATGAAAGGCTCTTGGTAGCTGAGTACATGCCAAATGATACTTTGTCCAAACATCTCTTTCACTGGGACAAGCAACCATTACCATGGGAAATGCGTGTCAGAGTTGCATACCATGTTGCCCAGGCACTAGATCATTGTAGCTTGGAAAACCGTAAAATATATCATGATCTGAATGCATATAGGATTCTTTTTGATGAGGATGGTGATCCACGCTTATCTAGTTTTGGGCTTATGAAAAATAGTCGAGATGGGAAAAGCTACAGTACTAATTTAGCTTATACTCCACCTGAATTTTTGCGAACAGGCAGGATAATCCCAGAGAGTGTGATCTACAGTTATGGAACTGTTCTTCTGGATCTTCTAAGTGGCAAGCATATTCCTCCAAGCCATGCTTTGGACCTAATTAGAGGGAAAAATGTTTTGTTGTTGATGGACTCTTCTCTAGAAGGGCAATATGCAAATGATGATGCTACAAAGTTGGTTGAGCTTGCTTCAAAATGTCTTCAGTTTGAGGCCAGAGAACGGCCTGAAATTAAATTTCTTCTTACTGCTGTTGCGCCTCTTCAAAAGCAGAAAGAGGTAACTTCTCATGTGTTAATGGGCTTAACTAAAAACACAGCAGTACTACCAACCATGCTTTCTCCTCTTGGAAAGGCTTGTGCAAGGATGGATCTCACTGCTGTGCATGATATATTGTTAAAAACAGGTTATAAAGATGAAGAAGGTGCAGAAAATGAGCTTTCATTCCAAGAATGGACACAACAAGTGCAAGATATCTTGAACACAAAAAAGTTTGGGGATATTGCATTCAGAGACAAGGATTTCAAAAATGCAATTGAGTATTACTCTAAGTTGGTGGTTATGATGTCTGTTCCTTCTGCTACTGTGTTTGCAAGGAGAGCCTTCTCCTACTTGATGAACGATCAAGCAGAACTGGCATTAAGGGATGCCATGCAAGCACAGGTATGCATACCGGATTGGCCAACTGCATTCTACCTGCAGGCTCTTGCTCTCTCAAAGCTGGGAATGGAAACTGATGCACATGACATGCTTAATGATGGGGCTGCCTTTGAAGCTAAGAGGTCTAACAGCTGGCGCGGTTAA 1491 0.4313 MGCLHSKTAHLHSPEDPPTALPDSKKPDPGNGGDDVDQECQVPAFKEYGLIELRRATNEFSTDYIVSESGEKAPNVVYRGKLENNRLVAVKRFSKLSWPDAQQFMAEAAGVGKVRHKRLVNLIGCCAEGDERLLVAEYMPNDTLSKHLFHWDKQPLPWEMRVRVAYHVAQALDHCSLENRKIYHDLNAYRILFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRIIPESVIYSYGTVLLDLLSGKHIPPSHALDLIRGKNVLLLMDSSLEGQYANDDATKLVELASKCLQFEARERPEIKFLLTAVAPLQKQKEVTSHVLMGLTKNTAVLPTMLSPLGKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQDILNTKKFGDIAFRDKDFKNAIEYYSKLVVMMSVPSATVFARRAFSYLMNDQAELALRDAMQAQVCIPDWPTAFYLQALALSKLGMETDAHDMLNDGAAFEAKRSNSWRG* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0615 496 Gene3D Transferase(Phosphotransferase) domain 1 140 332 - -
Gso5g0615 496 MobiDBLite consensus disorder prediction 1 38 - -
Gso5g0615 496 SUPERFAMILY TPR-like 387 485 IPR011990 GO:0005515
Gso5g0615 496 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK2 1 495 - -
Gso5g0615 496 Gene3D Phosphorylase Kinase; domain 1 35 138 - -
Gso5g0615 496 SUPERFAMILY Protein kinase-like (PK-like) 51 314 IPR011009 -
Gso5g0615 496 ProSiteProfiles Protein kinase domain profile. 63 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g0615 496 Pfam Protein tyrosine and serine/threonine kinase 76 311 IPR001245 GO:0004672|GO:0006468
Gso5g0615 496 Gene3D Tetratricopeptide repeat domain 386 495 IPR011990 GO:0005515
Gso5g0615 496 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 495 IPR045845 GO:0004672|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0615 Gso-Chr5 7449418 7455309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0615 14 317 Glycoside Hydrolase AT3G07070 33.537 5.42e-41 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Gso5g0615 PK_Tyr_Ser-Thr 6.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0615 K14500 - gmx:100793576 1003.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0615 5 7449418 7455309 Gso17g1295 17 12863999 12870043 GST