Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0552 ATGCCTTTTCATCTCCGCACGTCTCACTCTCGCCTTCACCCTACCTTTTCATCTCCGCAAATCTCCGTTGTGACCTTCCACAAACCCCCTTCACACTCTCAGCTTTACTCTCGACCTCTCGGAAGCCTAGCGGTGGGGGCGACACCTCCATCGTCGCAGCAGCAGGGACTCTGGTTCTTCCTCCGCTTCCACAATATGCCACGTGTTCATACCCTCGCGCATCTCCCCCAGGTCGAATCTGTCTTGATTGCGGCAAGTAATGCTACGAAGGAGAAGGCACAGGTAATAAGAACCTACACAAAGCAGCTACTACTTGTACTCGAGTACTTGCACAAAAATGGAATCATGCACAGAGACATTAAGGGGCCAATATTCTTGTAG 381 0.5118 MPFHLRTSHSRLHPTFSSPQISVVTFHKPPSHSQLYSRPLGSLAVGATPPSSQQQGLWFFLRFHNMPRVHTLAHLPQVESVLIAASNATKEKAQVIRTYTKQLLLVLEYLHKNGIMHRDIKGPIFL* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0552 126 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 95 122 - -
Gso5g0552 126 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1 95 122 - -
Gso5g0552 126 Gene3D Transferase(Phosphotransferase) domain 1 77 123 - -
Gso5g0552 126 ProSiteProfiles Protein kinase domain profile. 1 126 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g0552 126 SUPERFAMILY Protein kinase-like (PK-like) 93 121 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0552 Gso-Chr5 6363541 6366261 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0552 95 122 MAP Kinase Kinase Kinase AT1G09000 78.571 5.17e-09 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gso5g0552 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0552 - K20606 gsj:114412216 258.84