Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0544 ATGATTGGTTTTGTCAATATTTTTATGCAAATACTTTGGGCTGGTTTTGGACCTGGTTGTAGAGAAAAAAGAAGGCTTCAAGTGCTCCCAAATGTGAGAAGAAGGGTAAGATTACTCGGTATCCATACGAATCTATGCTCAGAAAATAACTCAATGGTTGTTACTTGGATGTTTATGAATAAAGCTCTCAAGAAACTAACCCACACACATACGGGCATCAACGTGATTCAAAGTATAGTTTACAGTCGCGGGTCAAACTTAACAAGGATTTATTTTAGTCGTTTTTATATGTTTGTTCTGGAGAAAGATGATGAGATCATTGCTGCAGCTTCTATAAGAAGGATTTGTCAGCAAGCATAG 360 0.3694 MIGFVNIFMQILWAGFGPGCREKRRLQVLPNVRRRVRLLGIHTNLCSENNSMVVTWMFMNKALKKLTHTHTGINVIQSIVYSRGSNLTRIYFSRFYMFVLEKDDEIIAAASIRRICQQA* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0544 119 PANTHER GNAT FAMILY ACETYLTRANSFERASE 49 114 - -
Gso5g0544 119 PANTHER PHD FINGER PROTEIN 12 49 114 IPR042163 GO:0003714|GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0544 Gso-Chr5 6209294 6210855 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0544 49 113 PHD Transcription Factor Family AT5G36670 46.154 8.32e-13 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0544 - - gmx:100526888 229.95