Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0480 ATGTCGGCTTACAGAGACGAGGATCCCCGTCTTCATGGCATCAAAACTAAGATTCGTGTTGTCCCTAATTTCCCCAAACCTGGTATTATGTTCCAAGACATTACTACTCTGTTGCTTGATCCCAGGGTCTTTAAGGACACCATAGATTTGTTCGTTGAGCGATACAAAGGCAAAAACATTTCTGTTGTTGCAGGAATTGAAGCTCGGGGTTTCATTTTTGGTTCTCCCATTGCACTGGCAATAGGAGCAAAGTTTGTACCATTGAGGAAACCGAAAAAATTGCCTGGCAAAGTTATTTCTCAAGAGTATATTCTGGAATATGGAAGAGACTGTCTTGAGATGCATGTTGGAGCTGTTGAACCTGGTGAGCGTGCTTTAGTTGTTGATGATTTGATTGCAACTGGAGGAACACTCTGTGCAGCTATGGACTTACTAGAGCGAGTGGGAGCAGAGGTAGTGGAGTGCGGATGTGTAATTGAATTGCCAGAATTAAAGGGCCGTGAACGGTTGAACGGGAAGCCCTTGCATGTGTTAGTGGAATGTTTTGAGTGCTGTGAATAG 561 0.4403 MSAYRDEDPRLHGIKTKIRVVPNFPKPGIMFQDITTLLLDPRVFKDTIDLFVERYKGKNISVVAGIEARGFIFGSPIALAIGAKFVPLRKPKKLPGKVISQEYILEYGRDCLEMHVGAVEPGERALVVDDLIATGGTLCAAMDLLERVGAEVVECGCVIELPELKGRERLNGKPLHVLVECFECCE* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0480 186 CDD PRTases_typeI 48 180 IPR000836 -
Gso5g0480 186 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 3-RELATED 2 180 - -
Gso5g0480 186 TIGRFAM apt: adenine phosphoribosyltransferase 14 179 IPR005764 GO:0003999|GO:0005737|GO:0006168
Gso5g0480 186 SUPERFAMILY PRTase-like 13 179 IPR029057 -
Gso5g0480 186 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 2 180 - -
Gso5g0480 186 Hamap Adenine phosphoribosyltransferase [apt]. 14 181 IPR005764 GO:0003999|GO:0005737|GO:0006168
Gso5g0480 186 Gene3D - 2 181 IPR029057 -
Gso5g0480 186 Pfam Phosphoribosyl transferase domain 48 167 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0480 Gso-Chr5 5158497 5164471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0480 1 181 PRT Gene Family AT1G27450 73.481 3.79e-95 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0480 K00759 - gmx:100790431 377.867