Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0469 ATGGCATCAAAACTACTACTAACCCTTTCTCTGCTACTCCTAACTCTCATCCTTCACACGTTTGGCACCACCGCACTTGCCAAACGAACCAACCCAAACCCACCCCCAAACCAAAACCCAACAACAACAGAATTCATCAAGTCCTCATGCAAGGCCACGCGCTACCCCGCCGCGTGCGTTCAAACCCTCTCGGGCTATGCCAGCGCGATTCGCCAGAGCGAGCAGCAACTCGCTGTCACGGCCCTCTCCGTGAGCGTGTCCAAGACGCGCTCATGCGCGTCGTTTGTGAAGGGAATGAAGCCCAGAGAGTACAACGCATTGCGTGACTGCGTAGAGAACATGAACGACAGCGTGGACCGTCTCAACCAATCGGTGAAGGAGCTCGGGCTCGTGGGTATGGGTATGGGTATGGGTAAGGCCAAGGGTAAGGGTAAGGCAAAGGACTTCGCGTGGCACGTGAGTAATGTTCAGACTTGGGTTAGCGCTGCCATCACTGATCAGGACACGTGTCTCGATGGGCTTGATGGGCCCCACGTGGACGCCAACTTGCGGGCTTCCGTTAGGCCCAGGGTTGTGTATGCTTCTCAGGTCACTAGTAATGCTCTTGCGTTGGTTAATCACTTTGCCTCCAAGTATCGTTCTGCTTAG 648 0.5494 MASKLLLTLSLLLLTLILHTFGTTALAKRTNPNPPPNQNPTTTEFIKSSCKATRYPAACVQTLSGYASAIRQSEQQLAVTALSVSVSKTRSCASFVKGMKPREYNALRDCVENMNDSVDRLNQSVKELGLVGMGMGMGKAKGKGKAKDFAWHVSNVQTWVSAAITDQDTCLDGLDGPHVDANLRASVRPRVVYASQVTSNALALVNHFASKYRSA* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0469 215 SMART PMEI_2 41 204 IPR006501 GO:0004857
Gso5g0469 215 Pfam Plant invertase/pectin methylesterase inhibitor 45 204 IPR006501 GO:0004857
Gso5g0469 215 PANTHER PECTINESTERASE INHIBITOR-LIKE 37 212 - -
Gso5g0469 215 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 207 IPR006501 GO:0004857
Gso5g0469 215 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 209 IPR035513 -
Gso5g0469 215 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 208 IPR035513 -
Gso5g0469 215 CDD PMEI-like_3 48 210 - -
Gso5g0469 215 PANTHER PECTINESTERASE INHIBITOR 9 37 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0469 Gso-Chr5 4984650 4985501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0469 33 205 Carbohydrate Esterase AT3G14310 27.624 1.43e-20 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0469 - - gmx:100810071 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0469 5 4984650 4985501 Gso17g1160 17 11107738 11108679 GST