Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0461 ATGGGTTCTCAACAGAAGCCCTGCGCCAACAACTGCGGTTTCTTCGGCACTTCCGAGAAGCGAAACCTCTGCTCCAAATGCTACAAGGACCTCTGTCTCGAAGAGGAGCTTGCGGCAATGAAGTCCGTGCTCTGCTCCCCCGCGCCACCCTCGCCGGGCACCGCGGGTCAGTCGAAACCGGCGAACCGGTGTGGGACATGCAACAAAAAAGTGGGTTTAACCGGTTTTGCGTGCAAGTGTGGGAGTACCTTCTGTGGGGTGCATCGTTACCCCGAGAAACACGAGTGCACCTACGATTTTAAGGGAGAGGCGCGCGAAGCGATTTCGAAGGCGAACCCTGTTGTTAAGGGTGACAAGGTTGATAGGTTTTAG 372 0.5591 MGSQQKPCANNCGFFGTSEKRNLCSKCYKDLCLEEELAAMKSVLCSPAPPSPGTAGQSKPANRCGTCNKKVGLTGFACKCGSTFCGVHRYPEKHECTYDFKGEAREAISKANPVVKGDKVDRF* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0461 123 ProSiteProfiles Zinc finger A20-type profile. 2 36 IPR002653 GO:0003677|GO:0008270
Gso5g0461 123 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 1 56 123 - -
Gso5g0461 123 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 1 3 43 - -
Gso5g0461 123 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 8 40 - -
Gso5g0461 123 Pfam A20-like zinc finger 7 29 IPR002653 GO:0003677|GO:0008270
Gso5g0461 123 PANTHER AN1-TYPE ZINC FINGER PROTEIN 56 123 - -
Gso5g0461 123 PANTHER AN1-TYPE ZINC FINGER PROTEIN 3 43 - -
Gso5g0461 123 SMART AN1_Zf_4 64 101 IPR000058 GO:0008270
Gso5g0461 123 Gene3D - 2 51 - -
Gso5g0461 123 SMART A20_3 5 29 IPR002653 GO:0003677|GO:0008270
Gso5g0461 123 Pfam AN1-like Zinc finger 64 100 IPR000058 GO:0008270
Gso5g0461 123 SUPERFAMILY AN1-like Zinc finger 51 118 IPR035896 -
Gso5g0461 123 Gene3D - 52 110 IPR035896 -
Gso5g0461 123 ProSiteProfiles Zinc finger AN1-type profile. 58 104 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0461 Gso-Chr5 4911814 4912267 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0461 6 123 C2H2 Transcription Factor Family AT3G52800 39.752 2.25e-33 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0461 - - gmx:100807386 269.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0461 5 4911814 4912267 Gso17g1155 17 11066325 11066734 GST