Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0444 ATGAGTTTCCTTCATCTCTTCTTTCATCTCTTTTTGTTGGTTGCATTTATTCCACAGATAGTTCATGGAAATGCAGAACTAAGAGCTCTGATGGACTTGAAATCTTCTTTGGACCCAAAAGACAAGCTCCTTGGTTCGTGGACCAGTGATGGTGATCCATGCAGTGGTTCGTTCTTAGGAGTTGTGTGCAACGAGCACAACAAAGTGGCTAATATATCATTGCCAGGAAGAGGTCTTTCTGGCCGTGTCTCTCCTGCTGTGGCTGAACTCAAATGCTTGTCAGGTTTATACTTGCATTACAACCTGCTCTCTGGGGACATACCAGGAGAGATTGCAAATCTTAAAGAATTGCTCGATCTTTATCTCAACTTTAATAATCTATCTGGAACCATTCCTTCTGATATCGGGAACATGACTAGCCTCCAAGTGCTGCAGTTAGGCTATAACCAGCTAGAGGGGACCATACCTGAGGAACTGGGTTCATTGAAGCAGCTTAATGTTATTTCTTTGCAACATAACAAATTAACTGGTGAAATTCCTCAAAGCTTGGGTCACTTGGAGAAGCTAAGGAAGCTATATTTGAGCTATAACAACTTCAGTGGCACAATTCCTGTAAAACTAGCTGATGTTGCAAACTTGGAAGTTCTAGATATTCAAAACAATCATCTTTCAGGAACTATTCCTTCTGCATTGCAGAGATTAAGGGAAGGATTCCAAGGTGCAAACAACCGAGATCTATGTGGAGATGACTTTTCTGCTTTGAAAACTTGCAACAAAGATAGAATATTTGGCGTTAGTCAGATTAGTGCCCCAAATATATCCATATACAGAAATCCTCCAATAACATTCCCGAAGCCTGTAAATGCCCACTTGCATTGTAACCAGACCCATTGCTCAAAGTCAAGAAGCTTTCTTCTTCTTGTCATTGCAGCAAGTGTTACAACTACTGTTATCACATTAATAAGTTCTGGAATTTTCATATTTGTCAGATACCGGCGCCAAAGGCAGAAGGTTAGGAACCCATCAGATTATTCTGAAGGCCAACATAGTCCTTACCAGCCTAAAGAGTTCTACAGAAGTTCATCTCCACTTGTTAATCTTGAGCATTATTATACTGGTTGGGATTCATTGGCTGATGGTCATAATGAGAGTGGATTATCCCTTGAATATTTGAACCGTTTTAGATTTAATATTGATGAGATTGAATCAGCATCAGGGCACCTTTCTGAGGCCAATTTATTGAGTAAGAGCAAATTCTCAGCTGTCTATAAAGGAATTCTTAGAGACGGTTCTCTTGTGGCTATTAGGAGTATTAGTGTGACTTGCTGCAAAGCCGAGGAAGGTGAATTTTTGAAGGGTTTGAGCCTGTTAACCTCACTGAGACATGAAAATATTGTTAAGATGAGAGGCTTCTGTTGCTCAAGGAGTAGAGGTGAATGGTTTTTTGTCTGTGACTTTGCCACTAGGGGTAATCTGTCTCAATATCTTGACAAGGAAGATGGAAGTGCCCATGTAATTGAATGGTCCAAGAGAGTTTCTATTATCAGGGGCATTGCAAAAGGTATTGGTTATTTGCACAGCAATGAAGCAAGCAAGCCTACAATAGTACACCAAAACATTTCAGTAGAAAAAGTTATTCTAGACCATGAATTTAACCCCTTGATCACAGATGCCGGCCTCCCTAAGCTTCTTGCAGATGATGTTGTCTTCTCAGCTCTTAAAGCAAGTGCTGCCATGGGATATCTAGCTCCCGAATACCTTACCACTGGACGCTTTACTGAGAAGAGTGACATATATGCATTTGGGGTTATTGTTCTTCAAGTTCTATCCGGAAAGGTATTGATGGGGGGTACAATCCGGGTGGCAGTTGAAGCTTTCAGATTTGAAGATTTTGTTGACACAAATCTGAAGGGAGATTATTCTAAATCTGAAGCCGCAATTCTTTCAAAGCTTGCAATTCAGTGCACTCTTGAAGTGCCAGAGCAAAGACCAACCATGGTGGAGGTGATTCAAGAGCTGACCATGCTTCCTAATCCTTCACATTCTTCATAA 2052 0.4084 MSFLHLFFHLFLLVAFIPQIVHGNAELRALMDLKSSLDPKDKLLGSWTSDGDPCSGSFLGVVCNEHNKVANISLPGRGLSGRVSPAVAELKCLSGLYLHYNLLSGDIPGEIANLKELLDLYLNFNNLSGTIPSDIGNMTSLQVLQLGYNQLEGTIPEELGSLKQLNVISLQHNKLTGEIPQSLGHLEKLRKLYLSYNNFSGTIPVKLADVANLEVLDIQNNHLSGTIPSALQRLREGFQGANNRDLCGDDFSALKTCNKDRIFGVSQISAPNISIYRNPPITFPKPVNAHLHCNQTHCSKSRSFLLLVIAASVTTTVITLISSGIFIFVRYRRQRQKVRNPSDYSEGQHSPYQPKEFYRSSSPLVNLEHYYTGWDSLADGHNESGLSLEYLNRFRFNIDEIESASGHLSEANLLSKSKFSAVYKGILRDGSLVAIRSISVTCCKAEEGEFLKGLSLLTSLRHENIVKMRGFCCSRSRGEWFFVCDFATRGNLSQYLDKEDGSAHVIEWSKRVSIIRGIAKGIGYLHSNEASKPTIVHQNISVEKVILDHEFNPLITDAGLPKLLADDVVFSALKASAAMGYLAPEYLTTGRFTEKSDIYAFGVIVLQVLSGKVLMGGTIRVAVEAFRFEDFVDTNLKGDYSKSEAAILSKLAIQCTLEVPEQRPTMVEVIQELTMLPNPSHSS* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0444 683 SUPERFAMILY Protein kinase-like (PK-like) 384 677 IPR011009 -
Gso5g0444 683 Pfam Protein tyrosine and serine/threonine kinase 412 673 IPR001245 GO:0004672|GO:0006468
Gso5g0444 683 Pfam Leucine rich repeat 140 199 IPR001611 GO:0005515
Gso5g0444 683 PANTHER OS01G0253100 PROTEIN 19 674 IPR045271 GO:0004714|GO:0006468
Gso5g0444 683 Gene3D Ribonuclease Inhibitor 23 172 IPR032675 -
Gso5g0444 683 PANTHER LEUCINE RICH REPEAT RECEPTOR KINASE 19 674 - -
Gso5g0444 683 Pfam Leucine Rich Repeat 212 234 IPR001611 GO:0005515
Gso5g0444 683 Gene3D Ribonuclease Inhibitor 173 247 IPR032675 -
Gso5g0444 683 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Gso5g0444 683 ProSiteProfiles Protein kinase domain profile. 408 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g0444 683 SUPERFAMILY L domain-like 27 234 - -
Gso5g0444 683 Gene3D Transferase(Phosphotransferase) domain 1 488 677 - -
Gso5g0444 683 Gene3D Phosphorylase Kinase; domain 1 375 486 - -
Gso5g0444 683 SMART LRR_typ_2 138 162 IPR003591 -
Gso5g0444 683 SMART LRR_typ_2 186 209 IPR003591 -
Gso5g0444 683 SMART LRR_typ_2 210 240 IPR003591 -
Gso5g0444 683 SMART LRR_typ_2 114 137 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0444 Gso-Chr5 4689482 4692169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0444 10 521 Miscellaneous Gene Families AT4G22730 55.344 0.0 547
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Gso5g0444 PK_Tyr_Ser-Thr 2.3e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0444 - - gmx:100779591 1328.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0444 5 4689482 4692169 Gso17g1140 17 10874876 10878806 GST