Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso5g0441 | ATGGGTCGTATGCACAGCCGCGGTAAGGGTATATCCTCTTCTGCTTTGCCCTACAAAAGGACACCTCCTAGCTGGCTCAAGATCTCTTCGCAAGATGTCGAAGAAAATATCTGCAAGTTTGCGAAGAAAGGTTTGACCCCGTCTCAGATTGGTGTCATTCTCAGAGATTCTCACGGTATTGCTCAGGTCAATAGCGTCACTGGCAGCAAAATCCTTCGCATCCTCAAAGCTCACGGACTTGCGCCTGAAATTCCAGAGGATCTGTACCATTTGATTAAGAAGGCAGTTTCAATTAGGAAGCATCTTGAGAGGAACAGGAAGGACAAGGACTCCAAGTTCAGGTTGATTCTTGTTGAGAGCAGAATCCACCGACTTGCTCGCTATTACAAGAAGACTAAGAAGCTCCCACCAGTCTGGAAGTACGAATCAACAACTGCTAGCACTCTGGTTGCTTAG | 456 | 0.4693 | MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA* | 152 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso5g0441 | 151 | ProSitePatterns | Ribosomal protein S15 signature. | 98 | 128 | IPR000589 | GO:0003735|GO:0005840|GO:0006412 | |
Gso5g0441 | 151 | Pfam | Ribosomal protein S15 | 74 | 145 | IPR000589 | GO:0003735|GO:0005840|GO:0006412 | |
Gso5g0441 | 151 | SMART | Ribosomal_S13_N_2 | 1 | 60 | IPR012606 | GO:0003735|GO:0005840|GO:0006412 | |
Gso5g0441 | 151 | Gene3D | - | 83 | 151 | - | - | |
Gso5g0441 | 151 | SUPERFAMILY | S15/NS1 RNA-binding domain | 66 | 142 | IPR009068 | - | |
Gso5g0441 | 151 | Pfam | Ribosomal S13/S15 N-terminal domain | 1 | 60 | IPR012606 | GO:0003735|GO:0005840|GO:0006412 | |
Gso5g0441 | 151 | Gene3D | - | 35 | 82 | - | - | |
Gso5g0441 | 151 | PANTHER | RIBOSOMAL PROTEIN S15P/S13E | 1 | 151 | IPR023029 | - | |
Gso5g0441 | 151 | CDD | Ribosomal_S15p_S13e | 70 | 143 | IPR000589 | GO:0003735|GO:0005840|GO:0006412 | |
Gso5g0441 | 151 | Hamap | 30S ribosomal protein S15 [rpsO]. | 3 | 149 | IPR023029 | - | |
Gso5g0441 | 151 | PANTHER | 40S RIBOSOMAL PROTEIN S13 | 1 | 151 | - | - | |
Gso5g0441 | 151 | SMART | Ribosomal_S15_2 | 70 | 149 | IPR000589 | GO:0003735|GO:0005840|GO:0006412 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso5g0441 | Gso-Chr5 | 4668696 | 4670714 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso5g0441 | 1 | 151 | Cytoplasmic Ribosomal Protein Gene Family | AT4G00100 | 93.377 | 1.06e-102 | 289 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso5g0441 | K02953 | - | gmx:100781750 | 301.982 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso5g0441 | 5 | 4668696 | 4670714 | Gso17g1138 | 17 | 10862806 | 10864728 | GST |