Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0419 ATGGCTTCTAGTGGTGCCACACCTCTGTGTAATAATCATTCTCTAATACATCTCCCAAAACGCTCCGTTTTGCTGAAGGACTACCTGAGGGATGACCTCAGTTCGTGTTCAACGAACGGTTTCAAATCGTTCCCGCGCCGACAATGCTGCACCACCGTGGGATTCTTCGGGGAGAAAGATCTCCAGCTCCAACGCAAAAGAAGGAGCACGCTCCCTCGACGACGATCCACAACCATATCGGCCTTGCAGAGAGCTTCTGGAGCAGTAATCAACGCGATAAAGTCACTGCCGCCGTTGTCACAAAAGAGTGGTAAAGCGAAGAAAGGTGTTGCCGGTGTTCTTTGTAGAAGCTTCTCGAGGAAGGTTTTGAGTAGAAGATTCTGGAGGAAAGCGGCGGCGAGGGAAGAGGGAAACGAAGATGTGCCGCGGAGGAGGAGATCTTTCCATGAACTCATCATGCTGGATCATGAGGAGCATCGTAAAGCGACGTCGTTGAATGAGGATAGTACTACCGTGTTCGCTGCGCATGCCCCGAGCGTGACCACCTCTTCCGCTTGTGGCAGTGAAAGCTGGGGAGACAGCGAGTTCACTTTTACATCTGCCGGTGCTTCTTCTTCCTCTGAGAGCTCCAACGAGAATTACCTCGTACTTGAGGGTACCGAAGAGGGTGCGCCCCATCACAAGGTGGAAGAAGTAGTAACTAAGGAATATTGGCCGAATGATGAGAAGGAACAATTTAGTCCTGAATCAATACTAGATTGCCCGTTTGAAGATGAAGAAGATATTTACAAGTCTCAAATCAATTCCACTTCCATTACTCTTTCCTTTTCTCAAGGAAGGAAACACAAGCATATGCACAAAAGATGCCATTTTGAAAGTGTGGTTCCACTGGAGCCAGTGGTTTTAGAGAAAATGTTCGCGCGGTTAGAGCTGGAGGATGAACCACACAACCATTATACAAAACAATGTTCCCGCTTATTAGTGCCAAAAGTGCGTGCCCAAAACAACTTGCGTCGTGACAACAATCACAACCATGAGGACAATGCTCGTGATCTTCTCAACTTCGTTAAAAGGTCAATTACACCCAACAGTTTGATAACAAAGGCAGAGAACCTGCTGTTTGATTACTTCAAGCAGAGTATTGAGGAAAACAAAGACATTGATTATTCAAAGAAGCTTCAAATTTGCAAGGTAGCTGAAGATTGGATAAATGGACAACCCCAAGAAATGTATTTGGGTTGGGAAGTGCAAGGAGGAAGGTGTGTCTACATTAGGGAGATGGATAAGTGTGAGGAGTGGAAGAGCTCTGATCAAGACATACAACAATTGGGTCAGGAGCTGGCAAACGAGGTGTTCACTAATTTGGTGAATGAGTTCACACTTGAACTCACGTCATGTGCTAGCCACTAA 1410 0.4645 MASSGATPLCNNHSLIHLPKRSVLLKDYLRDDLSSCSTNGFKSFPRRQCCTTVGFFGEKDLQLQRKRRSTLPRRRSTTISALQRASGAVINAIKSLPPLSQKSGKAKKGVAGVLCRSFSRKVLSRRFWRKAAAREEGNEDVPRRRRSFHELIMLDHEEHRKATSLNEDSTTVFAAHAPSVTTSSACGSESWGDSEFTFTSAGASSSSESSNENYLVLEGTEEGAPHHKVEEVVTKEYWPNDEKEQFSPESILDCPFEDEEDIYKSQINSTSITLSFSQGRKHKHMHKRCHFESVVPLEPVVLEKMFARLELEDEPHNHYTKQCSRLLVPKVRAQNNLRRDNNHNHEDNARDLLNFVKRSITPNSLITKAENLLFDYFKQSIEENKDIDYSKKLQICKVAEDWINGQPQEMYLGWEVQGGRCVYIREMDKCEEWKSSDQDIQQLGQELANEVFTNLVNEFTLELTSCASH* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0419 469 PANTHER OS04G0572500 PROTEIN 17 463 - -
Gso5g0419 469 PANTHER OS04G0572500 PROTEIN 17 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0419 Gso-Chr5 4416048 4419095 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0419 21 464 TRM (TON1 Recruiting Motif) Superfamily AT4G23020 28.631 5.13e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0419 - - gmx:102663212 902.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0419 5 4416048 4419095 Gso17g1113 17 10614835 10618452 GST