Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0404 ATGGAAGACGAAGTCAACAGAGAACTCGACCTTCTGCCATCTTCGCGCTCCAACTCCTCCCTCCTCCGCCTCTGCTCGGCGGTCTCCTCCTCCTCCACCACAGACTGCGGCGGAGGCGGCGGCGGTGCCCCCTCGCTCGACCTGCAGCTCTCCATCAGCGTGCGGCCGCCGGCGGCCGTGCTGATGTGCGACGGCGTGGAGGCACTCAAGTGGCAGGCCGCGGAGCAAATCCGCCTCGCCGCGATGGAGAAAGCCTACGCGGAGCGGGTGAGGGAGCTCACCCGGCGCGAGATGGAGATGGCGCAGACGGAGTTCGCACGTGCGCGCCAAATGTGGGAGCGTGCGAGAGAAGAGGTAGAGCGAGCCGAGAGAATAAAGGAGCGTGCCACCAGACAGCAGGTGGATTCCACGTGCATGGAGATCACTTGTCATTCCTGTAGGCAAAGGTTCAGGCCCGCTTGA 462 0.645 MEDEVNRELDLLPSSRSNSSLLRLCSAVSSSSTTDCGGGGGGAPSLDLQLSISVRPPAAVLMCDGVEALKWQAAEQIRLAAMEKAYAERVRELTRREMEMAQTEFARARQMWERAREEVERAERIKERATRQQVDSTCMEITCHSCRQRFRPA* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0404 153 Coils Coil 98 132 - -
Gso5g0404 153 PANTHER OS03G0310200 PROTEIN 1 152 - -
Gso5g0404 153 PANTHER OS03G0310200 PROTEIN 1 152 IPR039288 GO:0009630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0404 Gso-Chr5 4267445 4268336 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0404 49 151 C2H2 Transcription Factor Family AT2G01940 34.286 3.29e-15 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0404 - - gmx:100775486 263.077