Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0400 ATGAGAGATTTCACCTCACACTTGTACTCCAACATTGCAGACCCTGAACTTGTATATGACCTCAATATTACTGGCTATTTGAACTTTTTGTGTGGTCGAGGCTACAACAGTTCCCAGCTGTTCTACGGCAAGCCTTACACCTGTCCAAAGTCGTTCAGTTTAGCAGATTTCAATTATCCAGCAATCACAATTCCTCAGTTAGACCCTGGACATTCTCTGAATGTTACTCGAACTGTTACCAATGTTGGGTCTCCAAGAACGTATAGAGTGCACATCAAGGCACCACCACAAGTTGTAGTTACGGTCGAGCCTAGGAAACTGAGGTTCAAGAAAAAGGGTGAAAGAAAGGAGTTGAGAGTTACCTTGACCTTGAAGCCGCAAACTAAGAACACCACTGATTATGTTTTCGGGTGGTTGACGTGGACTGATCACAAGCACCATGTCAGGAGTCCCATTGCAGTCAAAATAGCACATTAA 477 0.4382 MRDFTSHLYSNIADPELVYDLNITGYLNFLCGRGYNSSQLFYGKPYTCPKSFSLADFNYPAITIPQLDPGHSLNVTRTVTNVGSPRTYRVHIKAPPQVVVTVEPRKLRFKKKGERKELRVTLTLKPQTKNTTDYVFGWLTWTDHKHHVRSPIAVKIAH* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0400 158 Pfam Fibronectin type-III domain 56 154 IPR041469 -
Gso5g0400 158 PANTHER PEPTIDASE S8 12 155 - -
Gso5g0400 158 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 12 155 - -
Gso5g0400 158 Gene3D - 30 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0400 Gso-Chr5 4223324 4224584 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0400 5 156 Subtilisin-like Serine Gene Family AT2G04160 48.408 4.05e-37 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0400 - - gmx:106798704 328.946