Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0398 ATGGCCACCACCACCACCAGTCTCGGCGGCGGCGTCGGCGGAGACGACCGCGTCCTCGCCACGGCTCAGCAGATCGTGAAGAGTCTCAGGGCGGCGAAAGAGGATCGCGAAGACATGCTTATGATCTTCTCCGCCTTCGATAACCGTCTCTCCGGCATCTCCGACCTCATCAACGGCGACGATTCGAAGTCTTCTGATGAAGAAGACCTCGACCGCTTTGAAGCCGCGGAGAAAGTGATTCTCGCTGATGCCTCTCTCTCCGGCGAGCCTTCGCGTCAATCCACGTCGCTCTTCAACCCTCCGAACAATCCCGCGGAGTACTTCTCTGCCGTCGACGAGATCATACACTGGATGGAGCAGTTCTCGATCGCGCCGCCGCCTTCATCCGCCCTGGGACGCACCGTCCATGTCATTGCGGACCGCGCCGAGAACGCGATTCAGCTCGCCATGTCGCGGCTCGAGGAGGAGCTGCGGCACGTGCTGATTTGCAACACGATCCCCCTCGACGCCGTGAGCCGCTACGGCTCGATCAAGAGGGTTTCGCTCTCGTTCGGCTCGCACGACGGCGCAATCGACGATTCCCCCCTCGAGAGCTTCGGCGAGGTCGACTCGAGCCGCTTCCACGACCGCGGCGCCAGCCTCGGCGACGACTTGTTCGTCGATTTGGTGCGTCCCGAGGCCGTTCAGGACCTCAGAGAAATCATCGATCGCATGGTTAGGTCTGGTTATGAGAGAGAGTGTCTTCAGGTTTATAGTAGCGTCCGTCGTGACGCTTTGGATGAGTGTTTGATTATTCTCGGTGTTGAGAGGTTGAGTATTGAAGAGGTTCAGAAGGTTGAGTGGAGGAGTTTGGATGAGAAGATGAAGAATTGGGTTCAGGCTGTTAAGGTTGTTGTTGGAGTGCTTCTCAGTGGTGAGAAGAGGCTGTGTGATGGTTTGTTTGGGGATTTGGATGATTTGAAGGAGATTTGCTTCAATGAGACTGCTAAGGGCTGTGTGATGCAGTTGCTGAATTTCGGTGAGGCTATCGCGATTTGTAAGCGGTCGCCAGAGAAGTTGTTTCGCATTTTGGACATGTATGAGGCTTTGAGGGATGCTATGCCTGATTTGCAGGCAATGGTTTCTGATGAGTTTGTGATTGGTGAGGCCAATGGAGTGCTGAGTGGGCTTGGTGAGGCTGCAAAAGGGACTTTTGCTGAGTTTGAGAATTGTATTAGGAATGAGACTTCCAAGAAGCCGGTCATAACCGGGGATGTTCATCCTTTGCCTCGTTATGTTATGAATTATCTCAGGTTGCTTGTTGATTATGGTGACCCTATGGATTCACTTCTGGAGCTTAGTGAGGAGGATCTCTATCGGTTTAAAAATGATCTTGGTGGTGATGGTTCGCAGTTAGAGGCCATGTCGCCCTTGGGACAGTGGATTCTGCTGCTCATGTCTGAGCTTGAGTACAATCTTGAGGAGAAGTCAAAGCTTTATGAAGACAGTGCGATGCAGCAGGTGTTTTTGATGAACAATCTGTATTACCTCGTGCGGAAAGTGAAGGACTCTGACCTTGGGAGGGTCTTGGGGGATAATTGGATTAGGAAACGCCGTGGTCAGATACGCCAGTATGCTACAGGGTATCTCAGAGCCTCTTGGAGCAAGGCCTTATCTTGTTTGAAGGATGAAGGGATTGGAGGGAGCTCCAATAATGCATCGAAGATGGCTTTGAAGGAGAGGTTCAAGAGTTTCAATGCTTGTTTTGAAGAAATTTACAGGGTTCAGACAGCTTGGAAGGTACCGGATGATCAGCTTCGGGAGGAGCTGCGGATATCTATATCAGAGAAGGTGATTCCTGCATACCGCTCGTTTGTGGGAAGGTTTAGGATTCAGTTAGAGGGAAGGCATGTGGGGAAGTACATTAAGTATACACCAGAGGATCTAGAGACCTATCTATTAGATTTATTTGAAGGATCCCCGGCTGTATTGCATCACATAAGGAGGAAAAGTACATAG 1998 0.515 MATTTTSLGGGVGGDDRVLATAQQIVKSLRAAKEDREDMLMIFSAFDNRLSGISDLINGDDSKSSDEEDLDRFEAAEKVILADASLSGEPSRQSTSLFNPPNNPAEYFSAVDEIIHWMEQFSIAPPPSSALGRTVHVIADRAENAIQLAMSRLEEELRHVLICNTIPLDAVSRYGSIKRVSLSFGSHDGAIDDSPLESFGEVDSSRFHDRGASLGDDLFVDLVRPEAVQDLREIIDRMVRSGYERECLQVYSSVRRDALDECLIILGVERLSIEEVQKVEWRSLDEKMKNWVQAVKVVVGVLLSGEKRLCDGLFGDLDDLKEICFNETAKGCVMQLLNFGEAIAICKRSPEKLFRILDMYEALRDAMPDLQAMVSDEFVIGEANGVLSGLGEAAKGTFAEFENCIRNETSKKPVITGDVHPLPRYVMNYLRLLVDYGDPMDSLLELSEEDLYRFKNDLGGDGSQLEAMSPLGQWILLLMSELEYNLEEKSKLYEDSAMQQVFLMNNLYYLVRKVKDSDLGRVLGDNWIRKRRGQIRQYATGYLRASWSKALSCLKDEGIGGSSNNASKMALKERFKSFNACFEEIYRVQTAWKVPDDQLREELRISISEKVIPAYRSFVGRFRIQLEGRHVGKYIKYTPEDLETYLLDLFEGSPAVLHHIRRKST* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0398 665 PANTHER EXOCYST COMPLEX PROTEIN EXO70 71 657 IPR004140 GO:0000145|GO:0006887
Gso5g0398 665 Gene3D Exocyst complex component Exo70 91 657 - -
Gso5g0398 665 SUPERFAMILY Cullin repeat-like 101 651 IPR016159 -
Gso5g0398 665 Pfam Exo70 exocyst complex subunit 289 647 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gso5g0398 665 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 71 657 - -
Gso5g0398 665 Coils Coil 139 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0398 Gso-Chr5 4203303 4205899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0398 16 664 EXO70 exocyst subunit family AT5G50380 58.971 0.0 761
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0398 K07195 - gmx:100809716 1247.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0398 5 4203303 4205899 Gso17g1095 17 10411308 10413922 GST
Gso4g1692 4 46911414 46916318 Gso5g0398 5 4203303 4205899 PCT
Gso6g1394 6 13744254 13749147 Gso5g0398 5 4203303 4205899 PCT