Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0348 ATGTCTCCTTCCAATTCCCCCGTCGCCGCCGAAACGCTATTTTCCGGCACGGTGTTCCTGATTCTCCTCCACCTCTCTCTCTTCCTTACTCCCACACTTTCTCTTGACTTCCTATTCAACTCCTTCGCCGGCGTCACCAACCTCACTCTCATCAAAGATGCCCGCGTCGACGCCTCCGTCATCCGCATGAACAACGACTCCAACCAATACTCCTACGGCCGCGCCTTCTACCCCATCAAAATCCCCATGACCAAAACAAACTCTTCCATTTCTTCCTTCTCCACTTCTTTTGTCTTCTCCATCTTGCCGCAGATCTCTACCAGCCCCGGCTTCGGTCTCGCCTTCGTCCTCTGCAACACCACCAACCCTCCCGGCGCCCTCGCCAGCCAGTACTTCGGCCTATTCACCAACGCAACCTCCCCCTCCGTTTTCCCCCTCGTCGCCGTCGAATTCGACACCGGCCGGAACCCCGAGTTCAACGACATCGACGACAACCACATCGGAATCGACCTCAACAACATTGAATCCATAAACGCCACCACCGCCGGCTACTTCAACTCGTCCGGCGCCTTCGTCCCGGTGCGCATGCGCACCGGCCAGAACATCCACGCCTGGATCGACTTCAACGGCGAGAATCTCGAGTTCAACGTAACCGTCGCGCCAGTCGGCGTTTCGCGCCCTACGAAACCCTCGCTTTCGTATCAGAATCCTGCCATAGCTGACTACGTGTCCGCCGACATGTACGTAGGGTTTTCCGCTTCGAAAACGAACTGGATCGAGGCGCAGAGAGTTCTCGCATGGAGCTTCAGCGATTCGGGACCTGCAAAGGAGCTCAACACAACGAATTTACCAGTGTTTCAACTAGAATCGTCTTCTTCCTCGATCTCCGGCGGCGCAATAGCGGGAATTGTCGTCGGTTGTTTTGTATTTGTCCTTATATGCGCTTCTGGTTTTTACCTATGGTGGCGAATGAACAAAGCGAAAGAGGAAGAAGACGAGATCGAAGACTGGGAGCTAGAGTACTGGCCGCACAGATTTTCCTACGAGGAGTTAAGTTCGGCGACGGGGGAGTTTCGGAAGGAGATGCTGTTAGGTTCTGGAGGGTTCGGGAGAGTGTACAGAGGGACGTTACCGAACCATACGCAAATTGCGGTGAAGTGCGTGAACCACGATTCGAAGCAAGGGTTGCGGGAATTCATGGCGGAGATTTCAAGCATGGGGAGGCTTCAGCACAAGAACTTGGTTCAAATGAGAGGGTGGTGCAGAAAGGGGAACGAGCTTATGTTGGTTTATGATTACATGCCCAACGGGAGTCTCAACAAGTGGGTTTTCGATAAGTCGGAGAAGCTTCTGGGGTGGGAGCAACGCCGTCGTATCCTTGTCGACGTGGCAGAGGGGCTTAACTACCTTCACCACGGTTGGGACCAGGTTGTTATTCACAGGGACATCAAATCGAGCAACATTTTGTTGGACGCCGACATGAGAGGGAGATTAGGGGACTTTGGTTTGGCCAAGCTTTACACGCACGGGGAGGTTCCCAACACCACACGTGTGGTGGGGACGTTGGGCTACTTGGCGCCGGAGCTGGCCACGGTTGCAGCGCCGACTTCGGCGAGTGACGTGTACAGCTTCGGGGTGGTGCTGCTGGAGGTGGCGTGCGGGAGGCGGCCGATTGAGACGTCGGTGGCGGAGGAGGAGGTGGTGCTCATTGATTGGGTGAGGGAGCTGTACGCCAAGGGTTGCGCGCGCGAGGCTGCGGATGCGTGGATTAGAGGGGAGTACGATGAGGGAGATGTGGAGATGGTGTTGAAGCTTGGGTTGGCTTGTTGCCACCCTGATCCTCAGAGGAGACCCACCATGAAGGAGGTCGTTGCGCTTCTCCTCGGAGAGGAGCCGCAGGAGGCCCCCGGAAAAGTCTTGTCCGATTTGGTTCGCGGCGGCAAGGATATGGATGAGACTGCGCCCTTGCAACCCTCCCCTCCTCCTGTTTGA 1992 0.5597 MSPSNSPVAAETLFSGTVFLILLHLSLFLTPTLSLDFLFNSFAGVTNLTLIKDARVDASVIRMNNDSNQYSYGRAFYPIKIPMTKTNSSISSFSTSFVFSILPQISTSPGFGLAFVLCNTTNPPGALASQYFGLFTNATSPSVFPLVAVEFDTGRNPEFNDIDDNHIGIDLNNIESINATTAGYFNSSGAFVPVRMRTGQNIHAWIDFNGENLEFNVTVAPVGVSRPTKPSLSYQNPAIADYVSADMYVGFSASKTNWIEAQRVLAWSFSDSGPAKELNTTNLPVFQLESSSSSISGGAIAGIVVGCFVFVLICASGFYLWWRMNKAKEEEDEIEDWELEYWPHRFSYEELSSATGEFRKEMLLGSGGFGRVYRGTLPNHTQIAVKCVNHDSKQGLREFMAEISSMGRLQHKNLVQMRGWCRKGNELMLVYDYMPNGSLNKWVFDKSEKLLGWEQRRRILVDVAEGLNYLHHGWDQVVIHRDIKSSNILLDADMRGRLGDFGLAKLYTHGEVPNTTRVVGTLGYLAPELATVAAPTSASDVYSFGVVLLEVACGRRPIETSVAEEEVVLIDWVRELYAKGCAREAADAWIRGEYDEGDVEMVLKLGLACCHPDPQRRPTMKEVVALLLGEEPQEAPGKVLSDLVRGGKDMDETAPLQPSPPPV* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0348 663 ProSitePatterns Legume lectins beta-chain signature. 147 153 IPR019825 -
Gso5g0348 663 MobiDBLite consensus disorder prediction 643 663 - -
Gso5g0348 663 SMART serkin_6 358 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g0348 663 Gene3D Phosphorylase Kinase; domain 1 343 433 - -
Gso5g0348 663 Gene3D Transferase(Phosphotransferase) domain 1 434 639 - -
Gso5g0348 663 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.1 18 649 - -
Gso5g0348 663 SUPERFAMILY Concanavalin A-like lectins/glucanases 35 276 IPR013320 -
Gso5g0348 663 SUPERFAMILY Protein kinase-like (PK-like) 335 627 IPR011009 -
Gso5g0348 663 CDD lectin_legume_LecRK_Arcelin_ConA 35 273 IPR001220 GO:0030246
Gso5g0348 663 CDD STKc_IRAK 364 627 - -
Gso5g0348 663 ProSitePatterns Protein kinases ATP-binding region signature. 364 386 IPR017441 GO:0005524
Gso5g0348 663 Gene3D - 33 294 - -
Gso5g0348 663 ProSiteProfiles Protein kinase domain profile. 358 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g0348 663 PANTHER - 18 649 - -
Gso5g0348 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 478 490 IPR008271 GO:0004672|GO:0006468
Gso5g0348 663 Pfam Protein kinase domain 359 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g0348 663 Pfam Legume lectin domain 35 283 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0348 Gso-Chr5 3654410 3656784 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0348 34 634 Receptor kinase-like Gene Family AT1G15530 68.197 0.0 811
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso5g0348 Pkinase 7.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0348 - - gmx:100780660 1301.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0348 5 3654410 3656784 Gso17g0716 17 6575326 6577788 GST