Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0347 ATGGAAGATGTGAATCGCACCCCAAGAGAAGCAAAGGATTACTATTCTAGATCAATATGGTTGTCAGAAACTGCGCAGACATTTGGGAATATCAAGAGAAGTGACAGAAATGTTGTTAATGGCAGAGATTCCTACGGCTATAACTCCCAAGAAATAGTGACTCCTGAAGTTTCTGGAGCGTTCGATGAAATCAAAGGTTTAATCAGAGTTAATGATGAGTGTGTTGGTGAAGAAAGCGGTGACTATGGCCACTATTCTAGACAATCGTTGACAACAGAAATTGTAGAGATAGTTGAAGATGGCAAGAGCATAAGCAACAAAGATAGAAGAGTTGATGATCTTTATGTGGCTGTTGGCAAAGATGACTTGGATGCAGTGAAATGGGCTCTTGATCATGCAGTTTCTCCCGGTTCCCGGATTTTTCTTATCCATGTCTCTTCTCCAATCACATTGATTCCTACACCAGTTGGTAAGTTTGAAAGAAGTAAATTGACCCCGCAACAAGTGGGAATATACGTGAATGAGGTGAACAACAAGAGGAAGGATCTTTTGCAAAAGTACATTCAGATGAGTAATGAAGCCAAGGTAACTGCAGAAACGTTGCTCCTGGAAAGCAATGACACAGAAAAAGCAATTCTGGACCTCATCTCTATTCTCAACATAACCAACATTGTCATCGGAATCAAAAAGCTACCCTACACACGGCGCAATAACAAATTGAGCAAAGGAGAGTTCGTAAAGAAACATGCACCGAGTTCCTGTGAAGTTACCTTGGTTTATAACGGCGAGGTGTTAGTGTCTGACCCTTACATGGATGGCTTGGTATCCTATGGCCTAGCATCGCAAAATAAAAGTCACTCGAAAAACAACTTCTTTCAGTGCATGTGCTTTTCAGGATGGGTGAGAGAAGACAATGGTAGTTGCTAG 927 0.4142 MEDVNRTPREAKDYYSRSIWLSETAQTFGNIKRSDRNVVNGRDSYGYNSQEIVTPEVSGAFDEIKGLIRVNDECVGEESGDYGHYSRQSLTTEIVEIVEDGKSISNKDRRVDDLYVAVGKDDLDAVKWALDHAVSPGSRIFLIHVSSPITLIPTPVGKFERSKLTPQQVGIYVNEVNNKRKDLLQKYIQMSNEAKVTAETLLLESNDTEKAILDLISILNITNIVIGIKKLPYTRRNNKLSKGEFVKKHAPSSCEVTLVYNGEVLVSDPYMDGLVSYGLASQNKSHSKNNFFQCMCFSGWVREDNGSC* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0347 308 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 121 257 - -
Gso5g0347 308 CDD STK_N 115 262 - -
Gso5g0347 308 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 75 303 - -
Gso5g0347 308 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 75 303 - -
Gso5g0347 308 Gene3D HUPs 116 259 IPR014729 -
Gso5g0347 308 Coils Coil 173 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0347 Gso-Chr5 3644119 3647005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0347 112 267 U-box Gene Family AT3G61390 29.630 6.33e-14 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0347 - - gmx:102668724 607.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0347 5 3644119 3647005 Gso17g0718 17 6585413 6588647 GST