Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0321 ATGGAAGAAACATTTGTTCCCTTACGTGGGATCAAGAATGACCTCAAAGGAAGACTTGTGTGCTACAAACAAGATTGGACTAGTGGATTCCGGGCAGGCATCAGGATCCTGGCCCCAACTACATATATATTTTTTGCTTCAGCAATTCCAGTTATCTCTTTTGGGGAGCAACTAGAGAGAAATACAGATGGAACTCTAACTGCAGTGCAGACCCTTGCATCAACCGCACTATGTGGCATTATCCATTCAGTCTTAGGAGGGCAGCCCCTCCTCATACTAGGCGTAGCCGAGCCAACAGTTCTGATGTATACATTCCTGTATGACTTCGCAAAAGGTAGAAAGGATTTGGGGCACAAACTATTCCTGCCTTGGACTGGATGGGTGTGTGTTTGGACCGCCGTGTTGCTCTTCTTGCTGGCCATTCTTGGTGCATGCTCCATAATCAACAGATTCACACGCCTTGCAGGTGAACTATTTGGTCTGCTAATAGCAATGCTCTTTATGCAGCAGGCTATAAGGGGACTAGTGGAAGAGTTTGGTGTGCCCCAGTCCCAGAGAGAAGGTACCAATCAGATTGCACTCCAATCCTCTTGGCTGTTTGGCAATGGAATGTTTGCTTTGGTTTTGTCATTTGGCCTGCTGTTTACTGCACTTAGAAGCCGTAAGGCTAGATCCTGGCGATATGGGGCAGGATGGTTGCGGGGATTTGTAGCTGATTATGGAGTCCCACTATTGATTCTTGTGTGGACTGCTGTGTCTTATATACCAACCAATAAGGTTCCGATGGGAATCCCTAGGCGACTTTTCAGTCCAAATCCATGGTCTCCTGGTGCACACTCAAATTGGACTGTAATTAAGGAAATGTTGAATGTGCCTCTCATCTATATTATTGGAGCATTTATACCGGCAACTATGATTGCCGTGCTTTACTACTTTGATCACAGTGTTGCATCACAACTTGCCCAGCAGAAGGAGTTCAATCTAAGAAAACCCTCTTCTTATCATTATGACCTTCTCCTCTTGGGCTTCTTGACCATATTGTGTGGACTTATTGGAATCCCTCCATCCAACGGCGTGATTCCCCAATCTCCAATGCATACTAAAAGCTTAGCTACTCTAAAACATCAGCTCTTGCGCAATAAGCTTGTATCTGTTGCACGAAAAAGCAAGCAGAAAAATACGAACCTGTGTCAGTTATACCGAAGTATGCAAGAAGCATATGATCAAATGCAGACTCCATTAGCCCGCCAAATACCACCTGCCTTGGGGCTAAAGGAGCTGAAGGAATCCACCATCCAACTGGCTTCAAGTCATGGATACATTGATTCCCCTGTTGATGAGACTGTTTTCGATGTGGATAACGATGTTGATGACCTTCTGCCAGTTGAAGTTAAAGAACAGCGCCTCAGCAATCTGCTGCAGGCATTGATGGTTGCGGCTTGTGTTGCTGCTATGCCTCTTTTGAAGAAGATACCAACTTCAGTGCTTTGGGGTTACTTTGCTTTTATGGCAATTGAAAGCTTGCCCGGAAATCAGTTTTGGGAGAGAATATTATATCTTTTCACTGCTCCAAGTCGAAGATACAAAGTGCTGGAGAAACAGCATGCAGCCTTAATTGAGACCGTGCCCTTCAAAACGGTTGCCATGTTTACCTTATTCCAGACAGCTTACTTGCTTCTCTGCTTTGGTCTAACCTGGATACCAATTGCTGGGGTCCTTTTCCCATTGTTAATCATGCTTCTTATCCCAGTACGCCAATATTTCCTTCCCAAGTTTTTTAAAGGAGCCCATCTTCAAGAATTGGATGCTGCAGCATACGAGGAAGCACCTGCTATTAGTTTCAACTTGTCATTCGATGATTCAGGAAGTCAGACAACAACAGTCAATAATAATAGTGGGGAAATTCTTGACGAAATTATTACAAGGAGTCGTGGGGAGATCTGCCTCAATCAAAAATCAAGGTGTTCAACTCCAAAATCATGTGAAGACACTGTACCTGCTTATGGAAATATCTCAAAGGATTCACAGCTCTCGAGTAACTAA 2043 0.443 MEETFVPLRGIKNDLKGRLVCYKQDWTSGFRAGIRILAPTTYIFFASAIPVISFGEQLERNTDGTLTAVQTLASTALCGIIHSVLGGQPLLILGVAEPTVLMYTFLYDFAKGRKDLGHKLFLPWTGWVCVWTAVLLFLLAILGACSIINRFTRLAGELFGLLIAMLFMQQAIRGLVEEFGVPQSQREGTNQIALQSSWLFGNGMFALVLSFGLLFTALRSRKARSWRYGAGWLRGFVADYGVPLLILVWTAVSYIPTNKVPMGIPRRLFSPNPWSPGAHSNWTVIKEMLNVPLIYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVSVARKSKQKNTNLCQLYRSMQEAYDQMQTPLARQIPPALGLKELKESTIQLASSHGYIDSPVDETVFDVDNDVDDLLPVEVKEQRLSNLLQALMVAACVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKVLEKQHAALIETVPFKTVAMFTLFQTAYLLLCFGLTWIPIAGVLFPLLIMLLIPVRQYFLPKFFKGAHLQELDAAAYEEAPAISFNLSFDDSGSQTTTVNNNSGEILDEIITRSRGEICLNQKSRCSTPKSCEDTVPAYGNISKDSQLSSN* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0321 680 PANTHER ANION EXCHANGE PROTEIN 1 650 IPR003020 GO:0005452|GO:0006820|GO:0016020
Gso5g0321 680 Pfam HCO3- transporter family 204 376 IPR011531 GO:0006820|GO:0016021
Gso5g0321 680 Pfam HCO3- transporter family 8 180 IPR011531 GO:0006820|GO:0016021
Gso5g0321 680 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016021
Gso5g0321 680 Gene3D Helical hairpin bin 18 60 - -
Gso5g0321 680 PANTHER BORON TRANSPORTER 2-RELATED 1 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0321 Gso-Chr5 3349744 3355853 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0321 1 673 Antiporters AT3G62270 75.074 0.0 1036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0321 K24194 - gmx:100815420 1331.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0321 5 3349744 3355853 Gso4g1550 4 44845138 44851080 PCT
Gso5g0321 5 3349744 3355853 Gso6g1527 6 15615272 15621193 PCT
Gso4g1550 4 44845138 44851080 Gso5g0321 5 3349744 3355853 PCT
Gso6g1527 6 15615272 15621193 Gso5g0321 5 3349744 3355853 PCT