Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0295 ATGAAAAGTGCCTTGCAATCTTTCTTTTCTTTTTCTCTATCAGCAGCCTTTTATTCCTCTGGCACAGTGCTGTCCATCGCTGGAGCATTACTAGTGACCCTTTACAAAGGAAGTCCCATCATCAGCTTTCGAACTCAACCCTCGCCAACACAACCATTGCCACCTTTGTTGGCTGAAACCAGTAACTGGGTTATTGGAGGTCTCTTCTTTGCCACTGCCTCTATTTCTCTTGCAGCCTGGAATATTACACAGGCAGCAATTCTGAAAGGATATTCATCTCAGTTAACCATATTAGCCTACTATTGCCTGTTTGGAACCATCCAAAGTGCAATACTTTCTCTCATTGTAGTCAGAGATCCAAATGACTGGAAAATAAGCCCTGACATTGATCTCATCGCTGTATTCTATTCAGCTGTTGTGGGAAGTGTGGTGACATTTTCTGTAAACACTTGGTGCATTAAAAAGAAAGGACCTGTATTTGTTAGCTTGTTCAAGCCTGTGGGGATTGCCATTGCTGCCTTTTCGACTGTTGTCTTCCTTGGTGAAACACTCCATGTTGGCAGTGTTGTTGGTGCAGTGATAATTGCCATCGGATTTTACACAGTATTGTGGGCACAATCAAAAGGGGAAAACGCAAAAGGCTTCCAAGTTGATGGACTGTCATCCCCGTCTGCCCAAGCGAGTCCTCTACTCGAGTTCCATGAAAGCAATGTTTTAGCATAA 723 0.4357 MKSALQSFFSFSLSAAFYSSGTVLSIAGALLVTLYKGSPIISFRTQPSPTQPLPPLLAETSNWVIGGLFFATASISLAAWNITQAAILKGYSSQLTILAYYCLFGTIQSAILSLIVVRDPNDWKISPDIDLIAVFYSAVVGSVVTFSVNTWCIKKKGPVFVSLFKPVGIAIAAFSTVVFLGETLHVGSVVGAVIIAIGFYTVLWAQSKGENAKGFQVDGLSSPSAQASPLLEFHESNVLA* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0295 240 Pfam EamA-like transporter family 65 203 IPR000620 GO:0016020|GO:0016021
Gso5g0295 240 PANTHER WAT1-RELATED PROTEIN 21 231 IPR030184 GO:0016021|GO:0022857
Gso5g0295 240 PANTHER WAT1-RELATED PROTEIN 21 231 - -
Gso5g0295 240 SUPERFAMILY Multidrug resistance efflux transporter EmrE 123 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0295 Gso-Chr5 3077306 3079255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0295 21 234 Nodulin-like Gene Family AT5G40240 37.327 1.80e-43 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0295 - - gmx:102659936 434.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0295 5 3077306 3079255 Gso17g0774 17 7171146 7173910 GST