Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0241 ATGTTCATGTTTTTGGTTAGCAGAGTAACTAAGGATTCAATTTCACGCAACCGCAATGCCTTTGCTTCTTTTGCTTTCTCTAGCAGGTGTGCTCATTCATTATCATTTGCCACAGTAGAAGCAGAAGAGATATCAGGTTCTAGGCCTGCTGAAGTTTTGAACCTGGTGCAAGGTAAATGGGTAGGATCTTCAAATTGGAACACAATTGCAGATCCTTTAAATGGTGACTCATTTATTAAAGTTGCTGAAGTTGATGAAACAGGCATTCAGCCTTTTATAAAAAGCTTGTCCAGCTGTCCCAAACATGGTGTACACAATCCTTTTAAGGCACCAGAGAGATATCTTATGTATGGAGATATATCTACTAAGGCAGCTCATATGCTATCACTTCCTAAGGTTTCGGATTTCTTTACAAAGTTAATACAAAGAGTTTCTCCAAAGAGTTACCAGCAGGCTTTTGGGGAAGTTTATGTGACACAAAAGTTTCTAGAGAATTTTTGCGGGGATCAGGTTCGTTTCCTGGCAAGGTCTTTTGGTGTCCCTGGAAATCATCTTGGACAACAAAGTCATGGTTTTCGTTGGCCATATGGTCCCGTGGCCATTATTACTCCTTTTAATTTTCCCTTGGAGATTCCTGTCCTTCAATTGATGGGTGCCCTTTACATGGGCAACAAGCCAGTCCTTAAAGTTGACAGCAAGGTGAGCATTGTTATGGAACAAATGTTGCGCCTGCTTCATACCTGTGGCTTACCTGCAGAAGATGTAGACTTCATAAATTCTGATGGGAAGACAATGAACAGGCTGTTGCTGGAGGCAAATCCACGAATGACCCTCTTTACTGGTAGTTCAAGAGTGGCAGATAAATTGGCTGTTGATTTGAAAGGTCGCGTTAAATTAGAAGATGCTGGATTTGACTGGAAAATACTGGGCCCTGATGTCCATCAGGAAGATTACATAGCGTGGGTCTGTGATCAGGATGCATATGCATGCAGTGGTCAGAAATGCTCAGCACAATCATTGTTATTTATGCATGAGAACTGGTCTAAAACTTCCTTGCTATCTAAGTTGAAAGATCTTGCTGAGAGAAGAAAGCTAGAAGACTTGACAATCGGCCCAGTCCTCACATGTACGACTGGTATGATGCTAGAACACAAGAATAAATTGCTTGAGATACCAGGATCAAAGCTGCTCTTTGGGGGTAGTCCTCTAGAGAACCATTCAATTCCACCTATTTATGGTGCCATTAAACCAACAGCTGTCTATGTTCCTCTCGAGGAAATTATGAAGGATAAGAATTTTGATCTTGTAACAAAAGAAATATTTGGACCCTTTCAGGTTATCACGGACTACAAAAACAGTCAACTATCAGTTGTATTGGATGCTGTGGAAAGAATGCATAACCATTTAACGGCTGCTGTAGTTTCAAATGATCCTTTGTTTTTACAGGAAGTTGTTGGCAATTCAGTAAATGGTACTACTTATGCTGGTCTAAGAGCAAGGACAACCGGAGCTCCTCAGAATCATTGGTTTGGTCCCGCTGGCGACGCTAGAGGTGCAGGAATTGGAACACCGGAGGCTATAAAACTTGTATGGTCTTGCCACAGAGAAGTTATATATGATTTTGGACCTGTGCCAAAGGATTGGAAAACTCCTCAGTCCACTTGA 1665 0.4156 MFMFLVSRVTKDSISRNRNAFASFAFSSRCAHSLSFATVEAEEISGSRPAEVLNLVQGKWVGSSNWNTIADPLNGDSFIKVAEVDETGIQPFIKSLSSCPKHGVHNPFKAPERYLMYGDISTKAAHMLSLPKVSDFFTKLIQRVSPKSYQQAFGEVYVTQKFLENFCGDQVRFLARSFGVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMLRLLHTCGLPAEDVDFINSDGKTMNRLLLEANPRMTLFTGSSRVADKLAVDLKGRVKLEDAGFDWKILGPDVHQEDYIAWVCDQDAYACSGQKCSAQSLLFMHENWSKTSLLSKLKDLAERRKLEDLTIGPVLTCTTGMMLEHKNKLLEIPGSKLLFGGSPLENHSIPPIYGAIKPTAVYVPLEEIMKDKNFDLVTKEIFGPFQVITDYKNSQLSVVLDAVERMHNHLTAAVVSNDPLFLQEVVGNSVNGTTYAGLRARTTGAPQNHWFGPAGDARGAGIGTPEAIKLVWSCHREVIYDFGPVPKDWKTPQST* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0241 554 Pfam Aldehyde dehydrogenase family 124 495 IPR015590 GO:0016491
Gso5g0241 554 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 328 339 IPR016160 GO:0016491
Gso5g0241 554 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 24 553 IPR044638 GO:0004029
Gso5g0241 554 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 308 497 IPR016163 GO:0016620
Gso5g0241 554 PANTHER DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 12A1, MITOCHONDRIAL 24 553 - -
Gso5g0241 554 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 46 305 IPR016162 GO:0016491
Gso5g0241 554 SUPERFAMILY ALDH-like 54 501 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0241 Gso-Chr5 2507772 2515088 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0241 1 554 Aldehyde Dehydrogenase Gene Family AT5G62530 78.276 0.0 937
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0241 K00294 - gmx:100813821 1094.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0241 5 2507772 2515088 Gso17g0822 17 7709646 7717948 GST