Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0240 ATGTGTTTATTGCGTGTTTTGAGTGCTGAATTCATTTTTACGATATGTAGGTTTGCTCATTCATTACCATTTGCAACTGTACAAGCAGAAGAGATATCGGACTCTAGGCCTGCTGAAGTTTTGAACCTGGTGCAAGGTAAATGGGCAGGATCTTCAAATTGGAATACAGTTGTGGATCCTTTAAATGGAGATTCATTTATTAAAGTTGCTGAAGTTGATGAAACAGGCATTCAGCCCTTTGTGGAAAGCTTGTCCAGCTGTCCCAAACATGGTGTACACAATCCTTTTAAGGCACCAGAGAGATATCTCATGTTTGGAGAGATATCTGCTAAGGCAGCTCACATGTTATCACTTCCTAAGGTTTCAGATTTCTTTACGAGGTTAATACAAAGAGTTTCTCCAAAGAGTTACCAGCAGGCTTTTGGGGAAGTCTATGTGACACAAAAATTTCTAGAGAATTTTTGTGGAGATCAGGTTCGTTTCCTGGCAAGGTCTTTTGGTGTACCTGGAAATCATCTTGGACAACAAAGCCATGGTTTTCGTTGGCCATATGGTCCTGTGGCAATTATTACTCCTTTTAATTTTCCCTTGGAGATTCCTGTCCTTCAATTGATGGGTGCACTCTATATGGGCAACAAGCCAGTCCTTAAAGTTGATAGCAAGGTGAGCATTGTTATGGACCAAATGTTGCGCCTGCTTCATAACTGTGGTTTACCTCTAGAAGATGTAGACTTCATAAATTCTGACGGGAAGACAATGAACAAACTGTTACTGGAGGCAAATCCACGGATGACGCTTTTTACTGGTAGTTCAAGAGTGGCAGAGAAGTTGGCTGTTGATTTGAAGGGCCGCGTTAAATTGGAAGATGCTGGATTTGACTGGAAAATACTGGGCCCTGATGTCCTTCAGGAAGATTACATAGCCTGGGTCTGTGATCAGGATGCATATGCATGCAGTGGTCAGAAATGCTCGGCACAGTCATTGTTATTTATGCATGAGAACTGGTCTAAAACTTCCTTGCTATCTAAGTTGAAAGATCTTGCTGACAGAAGAAAATTGGCAGACTTGACAGTCGGCCCAGTTCTCACAGTTACGACTGATTCAATGCTTGAACACATCAATAAGTTGCTTGAGATACCAGGATCAAAGTTGCTATTTGGGGGTCAACCTTTAGAGGATCATTCAATTCCACCTATTTATGGTGCTATGAAACCAACAGCTGTCTATGTTCCTCTTGAGGAAATTATGAAGGCTAAGAATTTTGAGCTTGTGACAAGAGAAATATTTGGACCATTTCAGATTGTTACGGATTACAAAAGCAGTCAACTATCAGTTGTATTGGATGCTTTGGAAAGAATGCATAACCATTTAACAGCTGCTGTAGTTTCCAATGATCCTTTGTTTTTACAGGAAGTCATTGGCCAATCAGTAAATGGTACTGCTTATGCTGGTTTAAGAGCAAGGACAACCGGAGCTCCACAGAATCACTGGTTTGGACCCGCTGGTGATGCTAGAGGTGCAGGAATTGGAACACCAGAGGCTATAAAACTTGTATGGTCTTGCCACAGAGAAATAATCTATGATTTTGGGCCTGTGCCAAAGAATTGGGAAGTTCCTCCTTCTACTTGA 1629 0.4144 MCLLRVLSAEFIFTICRFAHSLPFATVQAEEISDSRPAEVLNLVQGKWAGSSNWNTVVDPLNGDSFIKVAEVDETGIQPFVESLSSCPKHGVHNPFKAPERYLMFGEISAKAAHMLSLPKVSDFFTRLIQRVSPKSYQQAFGEVYVTQKFLENFCGDQVRFLARSFGVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMDQMLRLLHNCGLPLEDVDFINSDGKTMNKLLLEANPRMTLFTGSSRVAEKLAVDLKGRVKLEDAGFDWKILGPDVLQEDYIAWVCDQDAYACSGQKCSAQSLLFMHENWSKTSLLSKLKDLADRRKLADLTVGPVLTVTTDSMLEHINKLLEIPGSKLLFGGQPLEDHSIPPIYGAMKPTAVYVPLEEIMKAKNFELVTREIFGPFQIVTDYKSSQLSVVLDALERMHNHLTAAVVSNDPLFLQEVIGQSVNGTAYAGLRARTTGAPQNHWFGPAGDARGAGIGTPEAIKLVWSCHREIIYDFGPVPKNWEVPPST* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0240 542 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 316 327 IPR016160 GO:0016491
Gso5g0240 542 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 32 292 IPR016162 GO:0016491
Gso5g0240 542 PANTHER DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 12A1, MITOCHONDRIAL 15 541 - -
Gso5g0240 542 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 294 483 IPR016163 GO:0016620
Gso5g0240 542 SUPERFAMILY ALDH-like 42 489 IPR016161 GO:0016491
Gso5g0240 542 Pfam Aldehyde dehydrogenase family 56 484 IPR015590 GO:0016491
Gso5g0240 542 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 15 541 IPR044638 GO:0004029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0240 Gso-Chr5 2498964 2505868 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0240 13 542 Aldehyde Dehydrogenase Gene Family AT5G62530 80.414 0.0 929
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0240 K00294 - gmx:100794466 1081.63