Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0235 ATGACAAATCCTGCTCCTGCGAGCTTCTGGACTCAAGCAAACGCGCTTCTTCGCAAGAACCTTACCTTCCAGAAACGGAACGTGAAAACGAACGTTCAGCTGGTACTGTTCCCGGTGTTCCTCTGCTTGCTGCTTTTCGCGCTCCAACGCTTCATCGACACCCAAATCGGTGGGTCCGCCTTCAAATGCGGCTGCGTCTGCGCCAACAACACAACCCGAGAACACTCTCACTGCCCTGACTCACAAAAAGTGTGTGGGGTCCAGTACTCCGATTCCCTTCAAGCTGCCTTCTGCGCCATTCCCAACCCCATCGAATGGCCACCGCTCTTGCAGCTTCCGGCGCCGTCGAGCCGCGCCGTGCGAACCCCTTCTCTTCCCCTTTCGGATTTGCCCGATGCCTCGTGCCGGAGAACCGACTCGTGTCCTCTTACTCTGCTCTTCACCGCACAGAATCACTCCTTTGCGAAAAACGTGGCTGCTAATATGTTTGGGAGTGCCTTGAGTGTAAGTGACTTTGGTAGTGATTTCTTGGCTAGTTTGGCCATGAATGTACTGGGATCTGAATCACCTCCCTGGGGAAACAATTTTATTGAAATTGCTTTCTCTTCGGGTGACCCCATTTATTATCTACAAAAAAAGTGCACAGACACAGAGAAATCTGGACTCTCCTTTCCTTCCCTGCCGGCAGCTGACAATGAGATCAAATGTGCTCAGGCTCTAAATTTATGGCGTAATAGTTCTTCTGAGATCAACGGTGAACTATATAAAGGTTATCAAACAGGTAACACAGATGGACAAGTCAATGAGATAGTTTCAGCTTTTGATTTTCTAAATTCAAACAGGAATAGATATAATGTCAGTATATGGTACAACTCAACCTACAAGCAAGGCACAGGATTTAGTTCTAATGTGTTGTTGCGGATTCCTCGCTCTATAAATCTGCTATCAAATTCCTACCTGCAGTTTCTGCTTGGACCTGGAACCAAAATGTTATTTGAGTTTGTAAAGGAAATGCCAAAGCCTGAGACCAGTTTTAGGCTTGAGATATCTTCTCTTCTGGGAACTATGTTTTTTACATGGGTCATCCTGCAACTTTTTCCTGTTGTTCTGACATCACTAGTCTATGAGAAGCAACAAAAATTAAGAATCATGATGAAAATGCATGGTCTTGGTGATGGGCCGTATTGGATGATTTCATATGGTTATTTTCTTGCCATATCAATAATCTACATGTTGTGTTTTGTGATATTTGGTTCACTCTTAGGATTAAAAATCTTCACAATCAACGACTACAGCATCCAATTTGTGTTTTATTTCATCTATATTAACTTACAAATTGCACTGGCGTTTTTGGTGGCTTCCATATTTTCAAATGTTAAGACTGCTACAGTTACTGCATATATTGGTGTCTTTGGAACTGGGTTATTAGCTGGCTTTCTTTTCCAATTTTTTGTTCAAAATACATCATTTCCAAGAGGGTGGATAATTGTTATGGAGTTGTATCCTGGGTTTGCTTTATATCGCGGGTTATATGAGTTAGCACAATTTTCCTTTGAAGGGAGTAGTTCAGAGACAGGTGGTATGAAGTGGCAGAATCTGAGTGAAAGCACCAATGGCATGAAAGAGGTCTTAATTATCATGTTTGTTGAGTGGATAATGATGCTTTTTGCTGCCTTCTACGTTGACCAAGTATTGTCGTCAGGAAGTAGAAAAGGTCCGCTTTTTTTCTTGAAAGGATTTCAGAAAAGGCCTCCTTTCCAGAAGCTTGATGCCCAAATGCCGGTGTCAAAAGTATTCTCTCAAATGGAGAAACCTGATGTCATCCAAGAGAAGGAGAAGGTGGAGCAACTGCTACTTGAACCGACTATTAATCATGCAATTGTATGTGATGACCTGAAAAAGGTCTATCCAGGGAGGGATGGAAATCCAGATAAATATGCAGTTAGAGGGTTGTTTCTTTCTGTGCCTCAAGGGGAATGCTTTGGTATGCTTGGTCCCAATGGAGCTGGGAAGACCTCTTTTATCAATATGATGATTGGTCTCACAAAGCCAACCTCTGGTATGGCGTTTGTTCAAGGCTTGGACATAAGAACTCAAATGGATGGAATATATACTACCATGGGTGTATGCCCACAGCATGACTTGCTGTGGGAAAGCTTGACAGGTAGAGAACACCTATTTTTTTACGGCAGACTTAAAAATCTTAAAGGCTCAGTCTTGACACAAGAAGTAGAAGAATCTTTGGAGAGTTTAAACCTTTTTCATGGAGGAGTTGCTGATAAGCAAGTTGGAAAATACAGTGGAGGGATGAAGAGGAGGCTTAGTGTTGCAATTTCATTGATTGGGGATCCCAGAGTTGTTTACATGGATGAGCCAAGTTCCGGGTTAGACCCTGCCTCAAGAAAAAACTTATGGAATGTTGTCAAGCATGCGAAACAGAACCGTGCAATCATTCTCACCACACATTCCATGGAAGAGGCAGAGGCCTTATGTGATCGATTGGGAATATTTGTAAATGGTAACTTGCAATGTGTAGGAAATGCAAAGGAGCTGAAAGCAAGATATGGAGGAACTTACGTGTTCACAATGACAACATCTTCAGACCATGAAAAAGATGTGGAGAACATGGTGCAGAAACTCACCCCAAATGCCAACAAGATATACCATCTCTCTGGTACTCAGAAGTTTGAGCTGCCAAAAGGGGATGTTAGAATAACAGATGTATTCCAAGCTGTTGATGCTGCAAAGAGAAACTTCACCGTTTCTGCATGGGGCTTAGTTGACACCACATTGGAAGATGTCTTCATTAAGGTAGCACGCGAGGCTCAGGCATTTGACACCTTGTCATAA 2850 0.4298 MTNPAPASFWTQANALLRKNLTFQKRNVKTNVQLVLFPVFLCLLLFALQRFIDTQIGGSAFKCGCVCANNTTREHSHCPDSQKVCGVQYSDSLQAAFCAIPNPIEWPPLLQLPAPSSRAVRTPSLPLSDLPDASCRRTDSCPLTLLFTAQNHSFAKNVAANMFGSALSVSDFGSDFLASLAMNVLGSESPPWGNNFIEIAFSSGDPIYYLQKKCTDTEKSGLSFPSLPAADNEIKCAQALNLWRNSSSEINGELYKGYQTGNTDGQVNEIVSAFDFLNSNRNRYNVSIWYNSTYKQGTGFSSNVLLRIPRSINLLSNSYLQFLLGPGTKMLFEFVKEMPKPETSFRLEISSLLGTMFFTWVILQLFPVVLTSLVYEKQQKLRIMMKMHGLGDGPYWMISYGYFLAISIIYMLCFVIFGSLLGLKIFTINDYSIQFVFYFIYINLQIALAFLVASIFSNVKTATVTAYIGVFGTGLLAGFLFQFFVQNTSFPRGWIIVMELYPGFALYRGLYELAQFSFEGSSSETGGMKWQNLSESTNGMKEVLIIMFVEWIMMLFAAFYVDQVLSSGSRKGPLFFLKGFQKRPPFQKLDAQMPVSKVFSQMEKPDVIQEKEKVEQLLLEPTINHAIVCDDLKKVYPGRDGNPDKYAVRGLFLSVPQGECFGMLGPNGAGKTSFINMMIGLTKPTSGMAFVQGLDIRTQMDGIYTTMGVCPQHDLLWESLTGREHLFFYGRLKNLKGSVLTQEVEESLESLNLFHGGVADKQVGKYSGGMKRRLSVAISLIGDPRVVYMDEPSSGLDPASRKNLWNVVKHAKQNRAIILTTHSMEEAEALCDRLGIFVNGNLQCVGNAKELKARYGGTYVFTMTTSSDHEKDVENMVQKLTPNANKIYHLSGTQKFELPKGDVRITDVFQAVDAAKRNFTVSAWGLVDTTLEDVFIKVAREAQAFDTLS* 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0235 949 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 6 949 IPR026082 GO:0016021|GO:0055085|GO:0140359
Gso5g0235 949 PANTHER ABC TRANSPORTER A FAMILY PROTEIN 6 949 - -
Gso5g0235 949 Pfam ABC transporter 652 793 IPR003439 GO:0005524
Gso5g0235 949 CDD ABC_subfamily_A 631 852 - -
Gso5g0235 949 SMART AAA_5 657 841 IPR003593 -
Gso5g0235 949 Gene3D - 619 894 IPR027417 -
Gso5g0235 949 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 627 864 IPR003439 GO:0005524
Gso5g0235 949 ProSitePatterns ABC transporters family signature. 766 780 IPR017871 GO:0005524
Gso5g0235 949 Pfam ABC-2 family transporter protein 281 558 - -
Gso5g0235 949 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 626 855 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0235 Gso-Chr5 2446972 2456899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0235 631 875 Calmodulin-binding Proteins AT2G36910 24.521 1.33e-13 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0235 - - gmx:100792897 1874.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0235 5 2446972 2456899 Gso17g0827 17 7762079 7771212 GST