Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0203 ATGGCGCTGTTCAGAAGGTTCTTCTACCGGAAGCCGCCGGATCGGCTTCTGGAGATTTCCGAGAGAGTTTATGTTTTCGATTGCTGCTTCTCCAAGGATGTCTTGGAAGAAGATGAATACAGAGTGTATATGGGGGGGATTGTGGCTCAGCTACAGGATCACTTTCCAGATGCTTCTTTCATGGTATTCAACTTCCGAGAAGGGGAGAGACGCAGCCAAATCTCAGACATATTTTCTCAGTATGACATGACAGTTATGGAGTACCCTCGGCAATATGAGGGTTGCCCCCTTCTGCCTTTAGAGATGATCCATCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCTTTGGAGGGGCAGCAGAATGTGCTTTTGATGCACTGTGAAAGGGGTGGTTGGCCCGTGCTGGCATTTATGCTAGCAGGTCTTCTGTTATACCGGAAACAGTACAGTGGGGATCAGAAGACTCTTGAGATGGTCTACAAGCAAGCTCCAAGAGAACTACTACACTTTTTATCTCCTTTGGATCCACAGCCTTCTCATTTAAGATATCTTCAGTATATTTCCTGGAGACATTTGGGTTCTGAGTGGCCACCATCGGAAACACCCTTATATTTGGATTGTCTGATTCTTAGAGTCCTTCCATTATTTGATGATGGAAAAGGTTGCAGGCCTGTTGTACGTGTTTATGGTCAGGACCCTTCAATTCCTGCCAATAGAAGTTCAAAGCTACTTTTTTCATCTTCAATATCCATAAAGCATGTTCACCACTACCTACAGGCAGAGTGTATGCTCGTGAAAATTGACATCCGTTGTCGTGTTCAAGGGGATGTGGTTCTTGAGTGCATACATTTAAATGAAGATTTTGTTCATGAGGAGATGATGTTTAGAGTTATGTTTCATACTGCATTTGTGCGGTCAAATATTTTGATGCTGAACCGTGATGAAATTGATATTTTGTGGGAGGCAAAGGACCTATTTCCCAAGGACTTCAAAGCAGAGGTGCTTTTTTTGGACGCTGATGCTGTTATACCTGATCTAACCACAGTCACGGTGAGTGAAGATGCAAATGAGACTGAGAGTGCCGAGACAGAAAGTGCTTCACCTGAGGAATTCTATGAAGTAGAAGAGATTTTCAGCAATGTAATTGATGCACAGGAAGGTAAGACAGAATTTGATTCACAAGTTTTTCATGAAAATGCAGTGGATGTTGAAACTCATAAAGAGGTCTGGAGGCAAGAGTCGGATCCTCATACTTTTGAGGATTGTACACCCGATGACAGGATTCCTAAGCAGGTTGACAAGATGGATTCTGGTATTAATGCAGTGAAAGATATCTCCATTGATGATGTGCACTATAAATTTGATGGGAGCATGGATTCAGATCCTCATGCAGTGAAGGACATTGCTGTGGATGATGGAGAAATTAAGTCAACTTCCACTACATTTATTTCTGATACGATGAAACCTCCTCTGGAAACAAAGGAAGTCAACATGGATGTGCACCAAGAATTAGCAGTTATGCAAAATGAATATGATGAAGATAAGGAGGCAACAGAAAAGGAATTAGACTCCAAGGCAGGCCACCAGATGCCTGATTTGTCTGAACAAAAATCTGGTAAACTACTTTCATCTACTGCCAAGAAACAACCTCCATCTAACTCGAAGCCAGTTGGAGATTCAATTGCAGCAAAGCCAAAGATTAAACAGCAAGATACCCATGGTTTTCAGGCAAAACAAGCTAAGCCAAATGTAGTAACTAGGTGGATTCCTTCTAACAAGGGTTCTTATACAAATTCAATGCATGTCTATTATCCACCATCAAGGAATAATAGTGCACCAGCTGCGCTGACAAATTTCTCCTCCTCAAAGGAGAAAATGGAAGATGCCAAAACAAGATCTTTATCTGCTCCTGTTGTCTCTGCAGTCGTTTCTCTTGACAAGACAAATGACCTGAAAAGTCGGAAGGTTGCCACTTCAAAATCTTCTGCCTATATAGCAGCAGAAATGGATGAAAAATGTCCACCATTATCATTGCTGCCAATTAAAGAGACATCTTTTCAGTCAGATACTCAAGCCCAAGAACAGAGCTCAGAGCAAGGGCTACAGCCTCCCCCACCACCTCCCCTTCCATCTCAAAGTAGAATCCCTTCACATGTTTTTGAATCCTTATCATTAAAGGATGATGTATCAGCTCAAGATTCTCCATCTCAACTGTTATCACCATCTTCTTTGGGTGGAAAGGGGTCCACCATGGTGCCACCACCACCTTCAAGTTTAACGTCATTTACGAGACAACCTGCAACTTTTCATCCTTCCCCTCCACCCCCACCCCAACCCCCACCCCCGCCCCCACCTCCACCCCCATTTTTTGGGCTAAATAAAGGGAGCTTAGTTCCTTCCCCATCCCCTCCTGATCATAGTCCTTTTGTAGTGGGTACTGCAGTGGCACTTTCACAGCCTCCTCCACCACCACCTCCAATGCCGCCTCCAAGGTATGAAGTTTCATCCATTCCTCCTCTAACACCATTAGCATCACCTCTTCCAAAGCATGGAATTCCATCAATTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTGCCTACCATGTTTCCTACAGCTTCAATACATAGAGCTCCACCCCCTCCTCCCCCACTACCTCCATTTGCATCACATAAAGCTTCACCTCCACCTCCCCCTCCGCCTCCCCCTCTACCACCCTTAGCTAATTCACATATATATTCAGCTCCACCACCTGTACCTCCACCGCCACCTCCCCCTCCTTTTGGTAAAGCTTCACTACTTCCATCTCCACCCACACCTCCACCCCCACCACCTCTTCCTTCGTCAAGTGGAGCCCCACCCCCACCTCCACCTCCTCCATTGTCTAGAGTCCCCCTCCCCCCACCGCCACCTCTTCGTCCATCTAGTGGAGCCCCACCCCCACCACCCCTTCCTCCTTCGAGTGGAGCCCCACCTCCACCTCCTCCAATGTATGGAACCCTACTTGCCCCACCTCCTCCAATTCGTGGAGCACCACCACCACCACCGCCTCCTCCAATGCATGGAGCACCACCTCCAATGTATGGAGCACCACCTCCACCACCACCTCCTAGTGGGCGAGGACCGCCTCCTCCACCACCACCTCCTGGTGGGCGAGGACCACCTCCTCCACCACCACCTCCTGGTGGGCGAGGACCACCTCCTCCGCCTCCTCCAATGTATGGAGCACCACCTCCACCGCCACCTCCTGGTGGTCGAGGACCACCTCCTCCACCTACTCCCGGTGGTCGAGGTCCTCCTCCTCCACCTCCCCCTGGTGTTCCTGGGGCTCCTAGACCTCCTGGGGGTGGACCTCCACCACCTCCGCCCTTAGGTGCAAAAGGTGCAAATGTTGGAGCTGATCCAAGAGGGAGGGGACGTGGGTATGCACGCCCTGCAGGAGCTGGTGCAATGGCACCCAAACGGTCCTCCTTAAAGCCTTTGCATTGGAGCAAGGTTACAAGGGCACTACAAGGAAGTTTATGGGAAGAATTACAAAGACATGGAGAACCGCAAATTGCACCAGAGTTTGATGTTTCAGAGCTAGAGAAGCTTTTCTCTGCAAATGTTCCAAAACCTACTGATTCTGGCAAATCTGGAGGGCGGCGCAAGTCTGTTGGAGCTAAAACTGATAAAATCACCTTGGTTGATCTAAGGAGGGCTAATAATACTGAAATTATGCTCACCAAGGTTAAGATGCCACTTCCTGATATGATGGCTGCAGTACTAGCTTTGGATGAGTCGGTATTGGATGTTGATCAAGTGGAAAATCTCATTAAGTTTTGTCCTACCAAAGAGGAGATGGATCTTTTGAAGGGATACACTGGTGACAAGGAGCTTTTGGGGAAGTGTGAACAGTTTTTTTTGGAGTTGATGAAGGTGCCAAGAGTGGAGTCAAAATTAAGAGTATTTGCATTCAAGATTCAGTTTAATTCTCAGGTTATGGAATTTAAGAAGAGTTTAAACACTGTGAACTCTGCCTGTGAAGAGGTCCGGAATTCTGTTAAACTGAAGGACATAATGAAGAAAATTCTTTATTTGGGTAATACATTGAATCAAGGAACAGCAAGGGGATCTGCTGTTGGATTCAAGTTGGATAGTCTTTTAAAGCTCACTGACACTCGTGCTTCTAACAGTAAAATGACACTGATGCATTATCTTTGCAAGGTCCTGGCTGATAAGTCGCCCGGGCTCCTTGATTTCCACCTAGACCTTGTAAGCCTGGAATCTTCCACTAAGATACAATTGAAGTCATTAGCAGAAGAGATGCAGGCAATCATCAAGGGATTAGAAAAGGTTAAACAAGAATTTGCTGCATCTGCAAATGATGGACCTGTCTCTGAAGTTTTCCATAAGACATTGAAAGAATTTATAGCTGTATCTGAGTCAGAGGTAGCATCTCTAACAAACCTATATTCTGTAGTGGGTAGAAGTGCTGATGCACTTGCACTATATTTTGGTGAGGATCCTGCTCGTTGCCCAATGGAGCAAGTTACCACAACCCTGCTAAATTTTATACGATTGTTTCGGAAAGCACATGAAGAGAATATCAAACAAGCAGAGTTAGAGAAGAAGAAAGCTGAGAAAGAGGCTGAAATGGAGAAGGCCAAGGGCATTAACTTGACAAAGAAGGGTGCAAAAGATAGTTGA 4698 0.4632 MALFRRFFYRKPPDRLLEISERVYVFDCCFSKDVLEEDEYRVYMGGIVAQLQDHFPDASFMVFNFREGERRSQISDIFSQYDMTVMEYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGDQKTLEMVYKQAPRELLHFLSPLDPQPSHLRYLQYISWRHLGSEWPPSETPLYLDCLILRVLPLFDDGKGCRPVVRVYGQDPSIPANRSSKLLFSSSISIKHVHHYLQAECMLVKIDIRCRVQGDVVLECIHLNEDFVHEEMMFRVMFHTAFVRSNILMLNRDEIDILWEAKDLFPKDFKAEVLFLDADAVIPDLTTVTVSEDANETESAETESASPEEFYEVEEIFSNVIDAQEGKTEFDSQVFHENAVDVETHKEVWRQESDPHTFEDCTPDDRIPKQVDKMDSGINAVKDISIDDVHYKFDGSMDSDPHAVKDIAVDDGEIKSTSTTFISDTMKPPLETKEVNMDVHQELAVMQNEYDEDKEATEKELDSKAGHQMPDLSEQKSGKLLSSTAKKQPPSNSKPVGDSIAAKPKIKQQDTHGFQAKQAKPNVVTRWIPSNKGSYTNSMHVYYPPSRNNSAPAALTNFSSSKEKMEDAKTRSLSAPVVSAVVSLDKTNDLKSRKVATSKSSAYIAAEMDEKCPPLSLLPIKETSFQSDTQAQEQSSEQGLQPPPPPPLPSQSRIPSHVFESLSLKDDVSAQDSPSQLLSPSSLGGKGSTMVPPPPSSLTSFTRQPATFHPSPPPPPQPPPPPPPPPPFFGLNKGSLVPSPSPPDHSPFVVGTAVALSQPPPPPPPMPPPRYEVSSIPPLTPLASPLPKHGIPSIPPPPPPPPPPPPPLPTMFPTASIHRAPPPPPPLPPFASHKASPPPPPPPPPLPPLANSHIYSAPPPVPPPPPPPPFGKASLLPSPPTPPPPPPLPSSSGAPPPPPPPPLSRVPLPPPPPLRPSSGAPPPPPLPPSSGAPPPPPPMYGTLLAPPPPIRGAPPPPPPPPMHGAPPPMYGAPPPPPPPSGRGPPPPPPPPGGRGPPPPPPPPGGRGPPPPPPPMYGAPPPPPPPGGRGPPPPPTPGGRGPPPPPPPGVPGAPRPPGGGPPPPPPLGAKGANVGADPRGRGRGYARPAGAGAMAPKRSSLKPLHWSKVTRALQGSLWEELQRHGEPQIAPEFDVSELEKLFSANVPKPTDSGKSGGRRKSVGAKTDKITLVDLRRANNTEIMLTKVKMPLPDMMAAVLALDESVLDVDQVENLIKFCPTKEEMDLLKGYTGDKELLGKCEQFFLELMKVPRVESKLRVFAFKIQFNSQVMEFKKSLNTVNSACEEVRNSVKLKDIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNSKMTLMHYLCKVLADKSPGLLDFHLDLVSLESSTKIQLKSLAEEMQAIIKGLEKVKQEFAASANDGPVSEVFHKTLKEFIAVSESEVASLTNLYSVVGRSADALALYFGEDPARCPMEQVTTTLLNFIRLFRKAHEENIKQAELEKKKAEKEAEMEKAKGINLTKKGAKDS* 1566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0203 1565 MobiDBLite consensus disorder prediction 817 1129 - -
Gso5g0203 1565 PANTHER FORMIN-J 1 900 - -
Gso5g0203 1565 PANTHER FORMIN-J 1057 1558 - -
Gso5g0203 1565 MobiDBLite consensus disorder prediction 511 530 - -
Gso5g0203 1565 Gene3D Formin, FH2 domain 1170 1563 IPR042201 -
Gso5g0203 1565 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1103 1545 - -
Gso5g0203 1565 MobiDBLite consensus disorder prediction 676 1158 - -
Gso5g0203 1565 SMART it6_source 531 1565 IPR015425 -
Gso5g0203 1565 MobiDBLite consensus disorder prediction 536 556 - -
Gso5g0203 1565 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Gso5g0203 1565 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 336 IPR035892 -
Gso5g0203 1565 MobiDBLite consensus disorder prediction 768 792 - -
Gso5g0203 1565 SMART PTEN_C2_2 198 338 IPR014020 -
Gso5g0203 1565 Pfam Formin Homology 2 Domain 1156 1525 IPR015425 -
Gso5g0203 1565 Coils Coil 1432 1452 - -
Gso5g0203 1565 MobiDBLite consensus disorder prediction 727 767 - -
Gso5g0203 1565 Coils Coil 1526 1555 - -
Gso5g0203 1565 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Gso5g0203 1565 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1151 1551 IPR015425 -
Gso5g0203 1565 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 187 IPR029021 -
Gso5g0203 1565 MobiDBLite consensus disorder prediction 511 561 - -
Gso5g0203 1565 Gene3D Protein tyrosine phosphatase superfamily 14 204 IPR029021 -
Gso5g0203 1565 MobiDBLite consensus disorder prediction 681 699 - -
Gso5g0203 1565 MobiDBLite consensus disorder prediction 1540 1565 - -
Gso5g0203 1565 Gene3D - 205 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0203 Gso-Chr5 2137118 2152297 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0203 1 640 FH2 protein (formin) Gene Family AT5G07740 61.420 0.0 785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0203 5 2137118 2152297 Gso17g0632 17 5850155 5861145 GST