Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0192 ATGGGAATCCACCTCGCCTTGTTTCTCTTTCTGGCTTTTCTTCGAATGACTTTATCTCAAGATATTGAACATGGTTCAATTCTAGTAGATGGAATTCAAGCAATTGCTGAAACTGATGATAATTTCATCTGTGCTACTATTGATTGGTGGCCTCATGATAAGTGTGATTACAACTATTGCCCCTGGGGGGATTCATCTGCTGTAAATTTGGACTTGTCTCATCCTTTCTTTGCCAAGGCAATCCAAGCTCTCAAGCCTTTGAGGATAAGAGTCGGAGGTTCTTTGCAAGACCAAGTGCTGTATGAGGTAGGAAGTTTGAAGTCCCCTTGTCATCCATTTCAAAAGATGAAAGGTGGATTGTTTGGATTTTCAAAGGGATGTTTACAGATGAAAAGGTGGGATGAGCTGAATCATTTTTTCGACGAGACAGGTGCCCTTGTGACATTTGGTTTGAATGCACTCCATGGGAGGCACCAGATTAGTCATACTGTTTGGGGAGGAGACTGGGATCCTTCCAATGCCAAAGATTTTATCAATTACACCATTTCAAAGGGGTACAAAATTGATTCATGGGAATTTGGTAATGAGTTGAGTGGGAAGGGCATTGGGGCTAGAGTTGGTGCTGCACAGTATGGGAAAGACTTGATAAAGCTTAAAGAAATTTTACGCACATTATACAAAAACTCCACGTTCAAACCTTCCCTTGTAGCACCTGGAGGATTCTATAATAAGGAGTGGTTTGATAAGCTTCTTCAGGTTACAGGTCCAGGCATAGTCAATGTGCTGACACATCATGTGTATAATTTGGGCCCAGGTAGTGATGAGCATCTTGACAGGAAGATTCTAGATCCTGAGTGCTTGAGCAAGGTTGAATCAATTTTTAGCAATCTTTCAGAAACCATTCAAAAATATGGCCCTTGGTCTTCTGCATGGGTAGGTGAAGCTGGCGGGGCATTCAACAGTGGTGGTCGTTCTGTTTCTAACACATTTGTAAATAGCTTTTGGTACTTGGATCAACTTGGAATAGCATCCAGATACAACACTAAGGTTTATTGCAGGCAGACTTTAATTGGAGGAAACTATGGTCTTCTCAATACCACTACTTTCATTCCAAATCCTGACTATTACAGTGCACTGTTGTGGCATCAGCTAATGGGGAAGACTGTTCTTGCAGCTAGTAGTGATGTTTTTTCACCATCTTTACGCACTTATGCCCATTGTTCAAAAAGCAGAGATGGTATAACATTACTGCTGATCAACTTAAGCAATCAGACTCATTTCACACTCACGGTTCATGACCGTGTGCCTGTGAGCAATGGAGGAAATGAAAATGCTAAAAGCATCCATACAGAAAACTCATTCTTTAGTCATCTCAAGAAAGCATTTTCTTGGATTGGAACAAAAGGATCAGATGTCACATTCAGGGAGGAGTACCACTTAACTCCAAAAGATGATTACCTTAGAAGTCAAACCATGTTGCTGAATGGTATCCCCCTAGAATTGACAAATGATGGAGAAATTCCAACATTGGATCCACTACTCAATAATGTACATTCTCCAATACACTTGGCTCCTTTATCCATTGCATTTATTGTATTCCCCAACTTTGATGCTCCAGCTTGTGCGGGACTTAGAAAACCTTAA 1644 0.4094 MGIHLALFLFLAFLRMTLSQDIEHGSILVDGIQAIAETDDNFICATIDWWPHDKCDYNYCPWGDSSAVNLDLSHPFFAKAIQALKPLRIRVGGSLQDQVLYEVGSLKSPCHPFQKMKGGLFGFSKGCLQMKRWDELNHFFDETGALVTFGLNALHGRHQISHTVWGGDWDPSNAKDFINYTISKGYKIDSWEFGNELSGKGIGARVGAAQYGKDLIKLKEILRTLYKNSTFKPSLVAPGGFYNKEWFDKLLQVTGPGIVNVLTHHVYNLGPGSDEHLDRKILDPECLSKVESIFSNLSETIQKYGPWSSAWVGEAGGAFNSGGRSVSNTFVNSFWYLDQLGIASRYNTKVYCRQTLIGGNYGLLNTTTFIPNPDYYSALLWHQLMGKTVLAASSDVFSPSLRTYAHCSKSRDGITLLLINLSNQTHFTLTVHDRVPVSNGGNENAKSIHTENSFFSHLKKAFSWIGTKGSDVTFREEYHLTPKDDYLRSQTMLLNGIPLELTNDGEIPTLDPLLNNVHSPIHLAPLSIAFIVFPNFDAPACAGLRKP* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0192 547 Pfam Glycosyl hydrolase family 79, N-terminal domain 25 341 IPR005199 GO:0016020|GO:0016798
Gso5g0192 547 SUPERFAMILY (Trans)glycosidases 38 385 IPR017853 -
Gso5g0192 547 PANTHER GLYCOSIDE HYDROLASE FAMILY 79 AMINO-TERMINAL DOMAIN PROTEIN 1 543 - -
Gso5g0192 547 PANTHER HEPARANASE-RELATED 1 543 - -
Gso5g0192 547 Gene3D Glycosidases 64 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0192 Gso-Chr5 2023143 2028405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0192 1 542 Glycoside Hydrolase AT5G07830 60.617 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0192 K07964 - gmx:100782283 1134.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0192 5 2023143 2028405 Gso17g0647 17 5998128 6002933 GST
Gso2g0963 2 11147562 11151108 Gso5g0192 5 2023143 2028405 PCT