Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0180 ATGTCTGCTTGGGTTATAGCCTTTGCTACTGTTGTAGCAGCGACCCTTATTTACAGGCTTTTCAAGCTCATAACTGTGCCTTCATTACCACTGCCGCCAGGTCCTAGGCCATGGCCCATCGTGGGAAACTTGCCCCACATGGGCCCTGCGCCACACCAGGGTCTGGCAGCCTTGGCTCAGACTCATGGGCCGCTCATGCACCTCCGGTTGGGCTTCGTGGACGTGGTGGTCGCGTCTTCAGCCTCCGTTGCGGAGCAGTTCTTGAAGATCCACGACGCCAATTTCTGCAGCCGGCCATGTAACTCCAGAACCACATACTTGACCTATAACCAACAAGACCTCGTTTTTGCTCCCTATGGCCCACGGTGGCGGTTCCTTCGGAAACTAAGTACCGTTCACATGTTCTCTGCCAAGGCCATGGATGATTTTAGAGAACTGCGACAGGAAGAGGTAGAAAGATTGACATGCAATTTAGCAAGATCGAGTTCTAAAGTGGTGAATTTAAGACAATTATTGAACGTATGTACCACTAATATATTGGCGAGGATAATGATAGGACGGCGGATTTTCAGCGACAATAGTAGTAATTGTGATCCTAGGGCAGATGAGTTTAAATCTATGGTGGTGGACCTTATGGTATTGGCTGGAGTTTTCAATATCGGTGACTTCATTCCTTGCTTAGACTGGCTAGACCTTCAAGGAGTGAAACCTAAGACGAAGAAATTGTATGAGAGGTTTGATAAATTTTTAACCTCCATTCTTGAAGAACACAAGATTTCTAAGAATGAAAAACATCAAGACTTGTTAAGTGTATTTTTGTCACTTAAAGAGACTCCTCAAGGAGAACATCAACTTATTGAATCGGAGATCAAAGCAGTACTTGGGGATATGTTTACAGCTGGGACAGATACATCATCAAGCACAGTAGAGTGGGCAATTACAGAACTTATAAAGAACCCAAGAATTATGATCCAAGTCCAACAAGAATTGAATGTTGTTGTGGGTCAGGATAGGCTTGTGACTGAACTAGATTTACCCCACCTCCCTTACTTGCAAGCTGTGGTGAAGGAAACTTTACGTCTCCACCCACCAACCCCTCTTTCCCTCCCACGATTTGCTGAAAATAGTTGTGAGATATTCAATTATCACATCCCTAAAGGTGCAACTCTCTTGGTTAATGTTTGGGCCATAGGACGTGATCCTAAGGAATGGATTGACCCATTGGAATTCAAGCCTGAAAGGTTCTTTCCCGGTGGTGAGAAGGATGATGTTGATGTCAAAGGCAATAACTTCGAGCTTATACCTTTTGGTGCTGGACGTAGAATATGTGTTGGTATGAGCTTAGGCCTAAAGGTTGTTCAACTGCTCATTGCTACCTTAGCCCACTCATTTGATTGGGAATTGGAGAATGGGGCTGACCCAAAAAGGCTCAACATGGATGAAACATATGGGATTACCCTCCAAAAGGCACTGCCTCTTTTTGTCCACCCTCATCCTAGGCTTTCACAACATGTGTATTCATCATCATCATCTTTGTGA 1539 0.449 MSAWVIAFATVVAATLIYRLFKLITVPSLPLPPGPRPWPIVGNLPHMGPAPHQGLAALAQTHGPLMHLRLGFVDVVVASSASVAEQFLKIHDANFCSRPCNSRTTYLTYNQQDLVFAPYGPRWRFLRKLSTVHMFSAKAMDDFRELRQEEVERLTCNLARSSSKVVNLRQLLNVCTTNILARIMIGRRIFSDNSSNCDPRADEFKSMVVDLMVLAGVFNIGDFIPCLDWLDLQGVKPKTKKLYERFDKFLTSILEEHKISKNEKHQDLLSVFLSLKETPQGEHQLIESEIKAVLGDMFTAGTDTSSSTVEWAITELIKNPRIMIQVQQELNVVVGQDRLVTELDLPHLPYLQAVVKETLRLHPPTPLSLPRFAENSCEIFNYHIPKGATLLVNVWAIGRDPKEWIDPLEFKPERFFPGGEKDDVDVKGNNFELIPFGAGRRICVGMSLGLKVVQLLIATLAHSFDWELENGADPKRLNMDETYGITLQKALPLFVHPHPRLSQHVYSSSSSL* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0180 512 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0180 512 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0180 512 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0180 512 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0180 512 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0180 512 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0180 512 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0180 512 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0180 512 Pfam Cytochrome P450 32 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0180 512 Gene3D Cytochrome P450 27 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0180 512 PANTHER FLAVONOID 3'-MONOOXYGENASE 4 498 - -
Gso5g0180 512 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0180 512 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0180 512 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0180 512 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0180 512 SUPERFAMILY Cytochrome P450 32 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0180 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Gso5g0180 512 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0180 Gso-Chr5 1915630 1918064 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0180 8 511 Cytochrome P450 AT5G07990 61.328 0.0 663
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0180 K05280 - gmx:100778531 1002.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0180 5 1915630 1918064 Gso17g0656 17 6084718 6087659 GST
Gso7g1849 7 41277595 41280170 Gso5g0180 5 1915630 1918064 PCT