Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0179 ATGTCTACTTGGGTTATAGGCTTTGCTACTATTATAGCAGCGGTCCTTATTTACCGGGTTCTGAAGCCCATAAGCAGGCCTTCTTCTTCATTACCTCTTCCACCAGGGCCCAGGCCATGGCCCATTGTCGGAAACTTGCCTCACATGGGCCCTGCGCCACACCAAGGCCTGGCAAACTTGGCTCAGACTCATGGACCGCTCATGCACCTCCGGTTGGGCTTTGTCGACGTGGTGGTGGCGGCTTCCGCCTCCGTGGCGGAGCAGTTCTTGAAGATCCACGACGCCAATTTCTGTAGCCGGCCACTGAACTTCAGGACCACATACTTGGCCTATAACAAACAAGACCTTGTTTTTGCTCCCTACGGCCCAAAGTGGCGGTTCCTGCGGAAACTAACTACCGTTCACATGTTCTCTGCCAAGGCCATGGATGATTTTAGCCAACTGCGACAGGAAGAGGTAGCAAGATTGACATGTAAATTAGCAAGATCAAGTTCTAAAGCAGTGAACTTAAGACAATTGTTGAATGTATGCACCACCAATGCATTGACAAGGATAATGATAGGACGACGAATTTTCAATGACGATAGCAGTGGTTGTGATCCTAAGGCGGATGAATTTAAATCTATGGTGGGGGAGCTTATGACATTGTTTGGAGTTTTCAATATCGGAGACTTTATTCCTGCTTTAGACTGGTTAGACCTTCAAGGAGTGAAAGCCAAGACAAAGAAACTACACAAAAAGGTTGATGCATTTTTAACTACCATTCTTGAGGAACACAAGAGTTTTGAGAATGACAAGCACCAAGGCTTGTTGAGTGCATTGTTGTCACTTACAAAGGATCCTCAAGAAGGACATACAATTGTTGAACCAGAAATCAAAGCAATACTTGCAAACATGCTTGTAGCTGGGACAGACACATCATCAAGCACAATAGAGTGGGCAATTGCAGAACTTATCAAGAATTCAAGAATTATGGTTCAAGTCCAACAAGAGTTGAATGTTGTTGTAGGACAGGATAGGCTTGTGACTGAACTAGATTTGCCCCACCTCCCTTACTTGCAAGCTGTGGTGAAGGAAACTTTACGTCTCCACCCACCAACCCCTCTTTCCCTCCCACGGTTTGCTGAAAATAGTTGTGAGATATTCAATTATCACATCCCCAAAGGTGCAACTCTCTTGGTTAATGTATGGGCCATAGGACGCGATCCTAAGGAATGGATTGACCCATTGGAGTTCAAACCTGAAAGGTTCTTGCCTGGTAATGAGAAGGTTGATGTTGACGTCAAAGGCAATAACTTTGAGCTTATACCTTTTGGTGCTGGGCGTAGAATATGTGTTGGTATGAGCTTAGGCCTAAAGATAGTTCAACTGCTCATTGCTACGTTGGCTCACTCATTTGATTGGGAGTTGGAGAACGGGACTGACCCAAAAAGACTCAACATGGATGAAACATATGGGATTACCCTCCAAAAGGCAATGCCTCTTTCTGTTCACCCTCATCCTAGGCTTTCACAACATGTGTATTCATCATCATCTTTGTGA 1542 0.452 MSTWVIGFATIIAAVLIYRVLKPISRPSSSLPLPPGPRPWPIVGNLPHMGPAPHQGLANLAQTHGPLMHLRLGFVDVVVAASASVAEQFLKIHDANFCSRPLNFRTTYLAYNKQDLVFAPYGPKWRFLRKLTTVHMFSAKAMDDFSQLRQEEVARLTCKLARSSSKAVNLRQLLNVCTTNALTRIMIGRRIFNDDSSGCDPKADEFKSMVGELMTLFGVFNIGDFIPALDWLDLQGVKAKTKKLHKKVDAFLTTILEEHKSFENDKHQGLLSALLSLTKDPQEGHTIVEPEIKAILANMLVAGTDTSSSTIEWAIAELIKNSRIMVQVQQELNVVVGQDRLVTELDLPHLPYLQAVVKETLRLHPPTPLSLPRFAENSCEIFNYHIPKGATLLVNVWAIGRDPKEWIDPLEFKPERFLPGNEKVDVDVKGNNFELIPFGAGRRICVGMSLGLKIVQLLIATLAHSFDWELENGTDPKRLNMDETYGITLQKAMPLSVHPHPRLSQHVYSSSSL* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0179 513 Gene3D Cytochrome P450 25 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0179 513 Pfam Cytochrome P450 34 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0179 513 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0179 513 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0179 513 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0179 513 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0179 513 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0179 513 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0179 513 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0179 513 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0179 513 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0179 513 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0179 513 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0179 513 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0179 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Gso5g0179 513 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 3 500 - -
Gso5g0179 513 SUPERFAMILY Cytochrome P450 34 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0179 513 PANTHER FLAVONOID 3'-MONOOXYGENASE 3 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0179 Gso-Chr5 1909463 1913193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0179 8 512 Cytochrome P450 AT5G07990 61.644 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0179 K05280 - gmx:100777999 984.171