Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0162 ATGGCAGCAAAGCTCTTGCATTCTTTAGCAGATGACAACACAGATTTGCAAAAGCAGATAGGATGCATGACTGGGGTTTCCCAACTCTTTGATCGTCACCATATTATTCCTCCTCGCCACGTTACCCAGAAGAGGCTTCCTCCAGGTAATTCCCACTTCAATCATGACAACATGGAAAGAGGTTCTAATAGCATACCCCAACGACAATCAGCAGCTAATATAAGGGGTGTGAGTGAAAAACAAAGAATTTCAACAGAATCATCAAGAACCTCATTCTCTTCTTCTTGTTCATCATCAATGTCCTCTTTGGACTATAAAGCTCAAGCAGACGCTCCCTTTGACCAGAATGGTTTTCCTAAAAGTCCTATGAGGGAGCCAGTTATGAACCAAACAAGTCCCCCTCCCCATTTAGGATGTCAGCCCCTTGATCCGAGGGATGTGGTGAAGGACTCTATGTATAGGGAGGCCATAGGACTATCCAAAGAAAGGAATTCCCCAAGACATTTTCAGCTGTCCTCCCAATTCATCAATGGAAAACAAACTCCTGTTGATCTAAGGGAGTCCCTGCGAGTCCTTGCTAAACTTAGAGAAGCACCTCGGCATTATGTTGAAGCTAAAGAACTTCCAAGATTATCATATGAAGTAAAAGATGGACATTGGCATTCCATCTCAAAGGATGCTCCTCGGTTTTCTTATGATGGAAGAGAAACAAGTGGTACAACTTTTGAATCACATGATACCTTCAAATGCCCATCAAAGCTAAAAGAGCTTCCTAGACATTCACTGGACAGTGGGGAAGGTTCTTGGCACGCACGTGGCTCTGATTCAAAACCCAGTAACTTCTCAAGAAATTTCAATACAGGTGGTGCCTCCACCTCAGTTGACAACGTTTCTAGTCAACAACAACGGTCAGCATCCCAGAACCGGCCACCTAGTGTTGTAGCAAAATTAATGGGCTTGGAAGCTTTGCCAGAATCCTATAAGGCCAGTGATACTAAGTCAAGTTTGAGTGAAACTGGCTCAACTCAAGGTAATGATCAGTTTTTGAAAAATGGACTCATCAAGCCACTTAGAGTTTATAATTCTCCTAAAATCTCATTGAAAGACACAACTTCCCCACGATGGAAGAATCCTGATTTGGCTGTGAAACCAACCTTAAGTTCAAGGTTTCCCATTGAACTAGCACCATGGAAGCAGCAGGATGGAAACCAAACCTCTGAGAAACTAACTTCCCGGGCCATAAAAGCCACAGAAAGATCACCAGATTCATTTCTCTCAGTTTATAGTGAGATTGAGAAGAGATTGAAGGACCTTGAATTTAAACAATCTGGAAGGGATCTCAGAGCTCTCAAACGGATACTGGAAGCAATGCAAGTAAAGGGGCTGTTAGAGACCAGAAAAGAAGAACAAGCTTCAAATGTTGGAAATAAAAGAGACTATGAACTAAATCCGAGCCTTATTCAGAATTCTATGTCAGTGAAGCAACAAACAGCCAGGGGAACTGACTCTGTAAAGGCTATAGAACCACCAATTGTGATCATGAAACCAGGAAAACTTATTGAGAAAAGTGGAATTTCTGCTTCTTCAGTCTTTCCAATTGGTGAAATCTCTGATTCCCATAAACTTCAGAGTGGTGGTGTACATGCACATGATAAGAAGGGGACAGCTTCCAATCAAATAGCAACGGATCAGTCTCGTAAAAACAATCACTGGGATGGTTCTACCAGTTTTAATGAAAAGAAAGCAAACAGTATCAAGACTATAAAATCAGCACAATCCCAACCAAGGTCTAAACAACTTCCAAAAGAAAATAGCCCAAGTTCGGTGAAGAATTCAGGATCTGTTAGCCCGAGAATGCAACAGAAGAATTTAGAGTCGGAGAAGCAATCTCGCCTGCCTACCCCACCATCAGATTCAAATAATCCCAGAAGGCAGTCCTGCAAGCAGACAACAGAATCAGGTTCTCCCAGTCGAAAACTAAGACCTAAAGTTGCTAATTCATGGTATAGTGATGACCGACTTAGTGAGACTAGCAATGAATTGAGAAGTCTAAGTAGTCAGTGGGATGAAATATCTTTGCAATCAGACAGTATCACTGTTGACTCAAAGATGGATATTGAAGTCACCAGCAGTTTACAATCTGATGATACTATTGATAGCCAATTCCGTTCTATGAAGGCTAACGAGCATTTGGTTTCAGGATCAACGCATAAGAAATCAACTCTGAGGTGGGATGAGGATGAGTCAATTGCAGAACCTGCAACAGATGCCTCAGATCATCCAAGTCTTGATTCAGTTGATGATGTCTCAGTGTACAAATATGATATGCCATCCCCAGTAAAGAGTAAATCCAATGCTCCTAAAGCTGATAATGGTCAAGAGTATAAAGCAAATGACAATACAGATCATTGGAACCCTGCAGATGGCTTCTTCGTTAACAACACGATCAACCGCAAGAAATTCCAAAGCGTAGATTGCCTTATTCAAAAGCTTAGGCAGCTAAACTCGAGTCATGATGAAACTAGAATCGACTACATAGCTTCCCTTTGTGAAAATACGAATCCAGACCACAGATACATTGCTGAAATACTATTAGCTTCAGGTCTATTACTGAGAGCTTTGAGTTCTGAGTTGCTGACATTTCAACATCACTCATCAGGTCATCCCATTAACCCTGAGTTATTCCTTGTGTTGGAGCAGACCAAGTTAAGTAGTTTGCTTTCGAAAGATGAAAGCAGCTTTGGAAAAGTTGCTTACATGAGGCTAAATACAGAGAAGTGGCACAGGAAACTCATCTTTGATGCTGTGAATGAGATTCTTGGTGAAAAACTAGGCTCGTTTGTTGAGCCATGCTTGAAGCCTAATGGACTCGCAACAAAATTCGTCAGTGCACAAAAACTTCTTAAAGAACTTTGCTTTGAGGTACAAAAACTTCAGTATGTGAAGCCAGATTGCAGTTTAGAAGATGAAGGGGATGGACTGAAAAGTATGCTAAGGGAAGATGTGATGTGTCACTCAGAAAACTGGACAGGTTTCCCTGGTGAATTACCTGGGGTTGTGTTGGATGTTGAGAGACTGATATTTAAGGATTTAATTGATGAGTTTGTGATTGATGAAATGGCTAGTTTGCGAGTGAAGTTCAGTAAGCACAGGTAG 3156 0.4148 MAAKLLHSLADDNTDLQKQIGCMTGVSQLFDRHHIIPPRHVTQKRLPPGNSHFNHDNMERGSNSIPQRQSAANIRGVSEKQRISTESSRTSFSSSCSSSMSSLDYKAQADAPFDQNGFPKSPMREPVMNQTSPPPHLGCQPLDPRDVVKDSMYREAIGLSKERNSPRHFQLSSQFINGKQTPVDLRESLRVLAKLREAPRHYVEAKELPRLSYEVKDGHWHSISKDAPRFSYDGRETSGTTFESHDTFKCPSKLKELPRHSLDSGEGSWHARGSDSKPSNFSRNFNTGGASTSVDNVSSQQQRSASQNRPPSVVAKLMGLEALPESYKASDTKSSLSETGSTQGNDQFLKNGLIKPLRVYNSPKISLKDTTSPRWKNPDLAVKPTLSSRFPIELAPWKQQDGNQTSEKLTSRAIKATERSPDSFLSVYSEIEKRLKDLEFKQSGRDLRALKRILEAMQVKGLLETRKEEQASNVGNKRDYELNPSLIQNSMSVKQQTARGTDSVKAIEPPIVIMKPGKLIEKSGISASSVFPIGEISDSHKLQSGGVHAHDKKGTASNQIATDQSRKNNHWDGSTSFNEKKANSIKTIKSAQSQPRSKQLPKENSPSSVKNSGSVSPRMQQKNLESEKQSRLPTPPSDSNNPRRQSCKQTTESGSPSRKLRPKVANSWYSDDRLSETSNELRSLSSQWDEISLQSDSITVDSKMDIEVTSSLQSDDTIDSQFRSMKANEHLVSGSTHKKSTLRWDEDESIAEPATDASDHPSLDSVDDVSVYKYDMPSPVKSKSNAPKADNGQEYKANDNTDHWNPADGFFVNNTINRKKFQSVDCLIQKLRQLNSSHDETRIDYIASLCENTNPDHRYIAEILLASGLLLRALSSELLTFQHHSSGHPINPELFLVLEQTKLSSLLSKDESSFGKVAYMRLNTEKWHRKLIFDAVNEILGEKLGSFVEPCLKPNGLATKFVSAQKLLKELCFEVQKLQYVKPDCSLEDEGDGLKSMLREDVMCHSENWTGFPGELPGVVLDVERLIFKDLIDEFVIDEMASLRVKFSKHR* 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0162 1051 MobiDBLite consensus disorder prediction 273 311 - -
Gso5g0162 1051 MobiDBLite consensus disorder prediction 328 348 - -
Gso5g0162 1051 MobiDBLite consensus disorder prediction 248 266 - -
Gso5g0162 1051 MobiDBLite consensus disorder prediction 555 657 - -
Gso5g0162 1051 MobiDBLite consensus disorder prediction 40 96 - -
Gso5g0162 1051 MobiDBLite consensus disorder prediction 224 312 - -
Gso5g0162 1051 MobiDBLite consensus disorder prediction 541 666 - -
Gso5g0162 1051 MobiDBLite consensus disorder prediction 730 801 - -
Gso5g0162 1051 MobiDBLite consensus disorder prediction 739 754 - -
Gso5g0162 1051 Pfam DUF761-associated sequence motif 298 327 IPR032795 -
Gso5g0162 1051 Pfam Domain of unknown function (DUF4378) 856 1034 IPR025486 -
Gso5g0162 1051 MobiDBLite consensus disorder prediction 326 348 - -
Gso5g0162 1051 MobiDBLite consensus disorder prediction 47 96 - -
Gso5g0162 1051 PANTHER LONGIFOLIA PROTEIN 1 1048 IPR033334 GO:0051513
Gso5g0162 1051 PANTHER LONGIFOLIA PROTEIN 1 1048 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0162 Gso-Chr5 1765900 1771742 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0162 136 1051 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 43.854 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0162 - - gmx:100775311 2021.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0162 5 1765900 1771742 Gso17g0676 17 6209733 6215775 GST
Gso5g0162 5 1765900 1771742 Gso4g1351 4 39251023 39257341 PCT
Gso4g1351 4 39251023 39257341 Gso5g0162 5 1765900 1771742 PCT