Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0141 ATGGAATGCAATGAAGATGATGAACTCCATGTAGCACCTTATGCTTCCTTAACACAGCGCCTTCACTATCATTCTCCAACCCAGAAACCTATCTTTACCTCAACAAACCTCTTGAACGTGGAAGCTGGTGAAGGCCATAATTTGAACCACATGGATCCACCTCATTGTTTGCATCATACTCCATTTTACTGCTCCCAATTTCAGCTTCCTAGCAACAGCAACAACCCAATTCAAATCCCACTCCATAAACCCTCTCCCAACATATCATCAAACAACAACAACAACAACAATTCTGACGAAGCAAAGGCTCTCCTTGATGACAGAAAGAAGAAGAGGATGTTCTCCAACAGAGAATCCGCTCGAAGGTCGCGGATGCGAAAGAAGCAACAAATTGAAGTCCTGCAGTACCATGTGGACAATCTGCAGACATTAAACCATCAACTGTCCCAAAAGATCATTTACTTGTTGGAATGTAACCAACAAATCCACCAACAGAATGCTCAGCTAAAAGAGAAAGTTTTCTCTCTTCAGGTAGCACTCTCTGACTTGTTGGCTACTTCTGGAAGTGCTGAGCAACCTCACCTCATCCCTAATGGCTTCCTAGCCGAGCCTTCGACTCGACCAATTGCGAGTTCCAGAACATAG 645 0.4403 MECNEDDELHVAPYASLTQRLHYHSPTQKPIFTSTNLLNVEAGEGHNLNHMDPPHCLHHTPFYCSQFQLPSNSNNPIQIPLHKPSPNISSNNNNNNNSDEAKALLDDRKKKRMFSNRESARRSRMRKKQQIEVLQYHVDNLQTLNHQLSQKIIYLLECNQQIHQQNAQLKEKVFSLQVALSDLLATSGSAEQPHLIPNGFLAEPSTRPIASSRT* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0141 214 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 111 126 IPR004827 GO:0003700|GO:0006355
Gso5g0141 214 MobiDBLite consensus disorder prediction 75 100 - -
Gso5g0141 214 Gene3D - 107 181 - -
Gso5g0141 214 MobiDBLite consensus disorder prediction 195 214 - -
Gso5g0141 214 PANTHER BASIC LEUCINE-ZIPPER 70-RELATED 1 207 - -
Gso5g0141 214 SMART brlzneu 104 168 IPR004827 GO:0003700|GO:0006355
Gso5g0141 214 CDD bZIP_plant_GBF1 109 157 IPR045314 GO:0003700|GO:0006355
Gso5g0141 214 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 207 IPR044521 -
Gso5g0141 214 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 106 169 IPR004827 GO:0003700|GO:0006355
Gso5g0141 214 MobiDBLite consensus disorder prediction 101 126 - -
Gso5g0141 214 MobiDBLite consensus disorder prediction 75 126 - -
Gso5g0141 214 SUPERFAMILY Leucine zipper domain 108 164 IPR046347 GO:0003700|GO:0006355
Gso5g0141 214 Pfam bZIP transcription factor 108 166 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0141 Gso-Chr5 1527837 1528711 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0141 106 211 bZIP Transcription Factor Family AT5G60830 52.778 1.77e-26 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso5g0141 bZIP_1 1.2e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0141 - - gmx:102664001 413.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0141 5 1527837 1528711 Gso17g0696 17 6439464 6439835 GST