Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0098 ATGATAAAGCAAATTCTTAGCAAATTGCCAAAGAAGGTGCCAAAATCTGACTCGTCAGATTCTGCAAGGAGTGATTCTAGTAATACAACTACTTTTGGGAATGTTTTTCAGTGTACAAATGTTGGAAGTACCATTTCAAGCAAATTAAATGTTGTGAAGCGGGTATCTTCTGTTGTTTTCCCTGCAAGCATGAGTGCTGGAGTGGAAGCAGTTGACCCAGGTCTGTCCTTCAAAGATGTTTCAAATACACAGAAGCAAAGCCTGTTCATTAGTAAGTTGAATCTTTGCTGCAAACTTTATGACATGAGTGATCCTGATAAGAACACTGCAGAGCAAGATCTCAAACGACAAACGTTGTTGGAACTTGTTGATTTTGTTTCTTCTGGATCTGTTAAGTTCACAGAACCAGCAATCGCCGCATTGTGTAAAATGTGTGCAACTAATTTGTTCAGGGTTTTCCCACCAAAGTTTCGAACAAGTACTAGTGGTGGAGAAACAGAAGATGAAGAACCTATGTTTGATCCTGCCTGGTCTCACCTACAAGTTGTTTATGATCTACTCCTTCAATTCATCAATTATAACTCTCTTGATGTGAAGCTGGCAAAAGCACATGTAGATCATGCTTTTGTTCTAAGATTACTTGATCTTTTTGATTCAGAGGACCCTAGAGAAAGAGATTGCTTGAAAACAATTCTGCATAGAATCTATGGGAAGTTCATGGTTCATAGGCCTTTCATACGGAAATCTGTTAGCAACATCATCTACCGGTTTGTTTTTGAGACTGAGCGGCATAACGGAATCGCTGAGCTGTTGGAGATTTTTGGGAGTGTCATTAGTGGGTTTGCCTTGCCATTGAAGGAAGAGCACAAGATATTTTTGTGGAGGGCTCTAATTCCTTTGCACAAACCAAAATCTGTTGGTATTTATCACCAGCAGTTAACATATTGTGTTGTACAGTTCGTTGACAAGGATCAAAGACTGGCTAGCTCTGTGATAAAGGGACTATTGAAGTTCTGGCCAGTGACAAATAGCCAAAAGGAGCTCATGTTCATTAGTGAGTTGGAAGAGATTTTGGAAATGGCTAGCATGGCTGAGTTTCAGAAGATCATGGTCCCACTGTTCCGACGAATGGCTTGCTGCCTCAATAGTTCTCATTATCAGGTGGCTGAAAGAGCACATTTGCTATGGAACAATGAGCACATTCTGAACCTGATAACGCAAAACAGACAGGTGATTCTGCCTCTGGTGTTCTCAGCACTTGTACATAATGCTCGAAGTCATTGGAACCAAGCAGTGCTGAACCTGACTCAGAACATAAGGAAGATGCTGTCTCAGATGGATGAAGAGCTGGTAGTTGCATGCCAACGCAGGATTGAGGAGGAAGATTCTAGTGCAAGTGCTGCAGCTGAGAGGAGAAGAGTAACATGGGAACGCATAGAAGCTGCTGCTGCTGCTGCAAGTACTAGTTGTGTCCAATCTTCTTCTGTAGGTGGAGGTGGAGATGTTTTAGTCCCAGTAAAATCTGCTACATGCTCAGTGGCATGCTAA 1548 0.4186 MIKQILSKLPKKVPKSDSSDSARSDSSNTTTFGNVFQCTNVGSTISSKLNVVKRVSSVVFPASMSAGVEAVDPGLSFKDVSNTQKQSLFISKLNLCCKLYDMSDPDKNTAEQDLKRQTLLELVDFVSSGSVKFTEPAIAALCKMCATNLFRVFPPKFRTSTSGGETEDEEPMFDPAWSHLQVVYDLLLQFINYNSLDVKLAKAHVDHAFVLRLLDLFDSEDPRERDCLKTILHRIYGKFMVHRPFIRKSVSNIIYRFVFETERHNGIAELLEIFGSVISGFALPLKEEHKIFLWRALIPLHKPKSVGIYHQQLTYCVVQFVDKDQRLASSVIKGLLKFWPVTNSQKELMFISELEEILEMASMAEFQKIMVPLFRRMACCLNSSHYQVAERAHLLWNNEHILNLITQNRQVILPLVFSALVHNARSHWNQAVLNLTQNIRKMLSQMDEELVVACQRRIEEEDSSASAAAERRRVTWERIEAAAAAASTSCVQSSSVGGGGDVLVPVKSATCSVAC* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0098 515 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 492 IPR002554 GO:0000159|GO:0007165|GO:0019888
Gso5g0098 515 PIRSF PP2A_B56 3 496 IPR002554 GO:0000159|GO:0007165|GO:0019888
Gso5g0098 515 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 492 - -
Gso5g0098 515 Gene3D - 82 482 IPR011989 -
Gso5g0098 515 MobiDBLite consensus disorder prediction 1 28 - -
Gso5g0098 515 SUPERFAMILY ARM repeat 86 460 IPR016024 -
Gso5g0098 515 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 76 483 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0098 Gso-Chr5 1093191 1095312 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0098 K11584 - gmx:100814349 951.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0098 5 1093191 1095312 Gso17g1014 17 9578851 9582436 GST