Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0082 ATGGAGGAACTCTTCTCCTCCCTCAAGCTTCTCTCTTTTACCTTCATGCTCCTTCTCTTCCTCCTCAAGCTCACTGTCTTGCTCTGGTGGCGACCCAGAAAAATTGAAGGCCATTTCTCCAAGCAAGGGATCAGAGGCCCCCCTTATCGTTTCTTCATTGGAAACGTTAAGGAACTTGTCGGCATGATGTTGAAGGCCTCTTCTCAACCTATGCCTTTCTCCCATAACATTCTCCCCAGAGTCCTTTCCTTCTACCATCACTGGAAGAAAATTTATGGTGCAACATTCCTAGTTTGGTTTGGACCCACTGTTCGTCTCACCGTCTCTGAGCCAGACCTCATCCGGGAAATCTTCACATCCAAGTCAGAATTTTACGAGAAAAACGAAGCTCCACCACTTGTGAAGCAGCTAGAAGGTGATGGGCTCCTTAGCCTCAAAGGAGAAAAATGGGCTCACCACAGAAAAATTATCTCTCCCACTTTTCACATGGAAAATCTCAAATTGCTGGTACCGGTGATGGCAACAAGCGTGGTAGAGATGCTGGAAAAGTGGTCGGCAATGGGTGAGAAGGGCGAGGTAGAAATCGAAGTTTCGGAGTGGTTTCAAAGCCTAACAGAAGATGTCATTACGAGGACCGCGTTTGGAAGCAGCTACGAAGATGGCAAAGCCATTTTCCGATTACAGGCCCAACAAATGGACTTGGCCGCCGATGCTTTCCAAAAAGTATTCATCCCAGGTTACAGATTCTTTCCCACAAGGAGGAATATAAGATCTTGGAAATTGGAGAAGGAGATTAAGAAATCGCTGGTGAAGCTGATCTCACGACGGAGAGAGAATGAGAAAGGGTGTGGGGTGGAGGAAAAAGAAAAAGGGCCAAAGGATTTGTTGGGACTAATGATTCAGGCATCGAACATGAACATGAACATGTCCAATGTCACAGTGGATGACATGGTGGAAGAGTGCAAGAGCTTTTTCTTTGCAGGCAAACAGACCACATCCAACCTGCTGACGTGGACGACCATTCTCCTTGCTATGCACCCACACTGGCAGGTGCGGGCACGTGAGGAGGTTCTCAAGGTGTGCGGATCACGTGACCACCCCACCAAAGACCATGTTGCAAAGCTAAGGACGCTGAGCATGATAGTGAACGAGTCGTTAAGACTGTACCCGCCGACGATCGCGACGATAAGAAGGGCGAAAGCGGACGTGGATTTGGGGGGATACAAGATACCAGGAGGGACGGAGCTGCTGATTCCAATCCTGGCCGTTCATCACGATCAAGCGATATGGGGGAAGGATGCGAACGAGTTCAATCCGGGGCGGTTCAGAGAAGGGGTGTCAAGAGCGGGCAAGCATCCATTGGGCTTCATACCGTTTGGAGTAGGTGTGCGGACATGCATCGGACAAAACCTGGCGCTGCTACAAACCAAACTCGCCCTTGCAATCATACTCCAGCGTTTTACTTTCTGCTTGGCCCCTACTTATCAGCACGCCCCAACCGTCCTCATGCTTCTCTACCCTCAGTACGGCGCACCTATCATTTTCCAACTCATCCACTAA 1560 0.4942 MEELFSSLKLLSFTFMLLLFLLKLTVLLWWRPRKIEGHFSKQGIRGPPYRFFIGNVKELVGMMLKASSQPMPFSHNILPRVLSFYHHWKKIYGATFLVWFGPTVRLTVSEPDLIREIFTSKSEFYEKNEAPPLVKQLEGDGLLSLKGEKWAHHRKIISPTFHMENLKLLVPVMATSVVEMLEKWSAMGEKGEVEIEVSEWFQSLTEDVITRTAFGSSYEDGKAIFRLQAQQMDLAADAFQKVFIPGYRFFPTRRNIRSWKLEKEIKKSLVKLISRRRENEKGCGVEEKEKGPKDLLGLMIQASNMNMNMSNVTVDDMVEECKSFFFAGKQTTSNLLTWTTILLAMHPHWQVRAREEVLKVCGSRDHPTKDHVAKLRTLSMIVNESLRLYPPTIATIRRAKADVDLGGYKIPGGTELLIPILAVHHDQAIWGKDANEFNPGRFREGVSRAGKHPLGFIPFGVGVRTCIGQNLALLQTKLALAIILQRFTFCLAPTYQHAPTVLMLLYPQYGAPIIFQLIH* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0082 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Gso5g0082 519 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0082 519 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0082 519 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0082 519 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0082 519 PANTHER CYTOCHROME P450 FAMILY MEMBER 10 513 - -
Gso5g0082 519 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0082 519 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0082 519 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0082 519 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0082 519 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0082 519 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0082 519 Gene3D Cytochrome P450 29 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0082 519 Pfam Cytochrome P450 82 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0082 519 PANTHER CYTOCHROMEA2 10 513 - -
Gso5g0082 519 SUPERFAMILY Cytochrome P450 39 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0082 Gso-Chr5 862422 865632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0082 1 516 Cytochrome P450 AT2G26710 78.503 0.0 834
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0082 K15639 - gmx:100775843 988.023