Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0027 ATGGCCTTCCATGGCTATGCTGCAGCACCAACAATTGCAGCAATTTTCTGCTTTCTATACTTCTTCCACAGGAGACTATGTTGCAGACACCCCCTTTTGACAGACTACCCCATCCTCGGCATGCTGCCACAATTACTCTTCAACCTGTGGCGTGCCCATGATTTTTTCACTGAGATATTGAAACTGCATGGACCAACAGGTGAGTTCACTGGACCTTGGTTTACCAACATGGACTATTTGGTCACTTGTGACCCCATCAACGTCCACCACATGCTGAGCAAGAATTTCCACAACTACGTCAAGGGACCCGAGTTTCGTCACATTTTTCAGGCCTTCGGAGACGGGATTTTCACCGCTGATTTTGAAGCATGGAAGTACAACAGGGATCTCTTCCATTCTCTCTTTAAACAGAAAAGCTTCGAGGTGTTTTTAGTGAAAACCATTCACAACAAGGTGCATAATGGTCTCCTTCCAATATTGGATCATGTACAGCAACAGGGAAGAGTTGTGGATCTTCAAGATGTCTTCAATCGCTTCACCTTCGATAACATATGTTCTATAGTTCTTGGAAATGACCCTAATTGTCTTTCCATTGATTTTTCTGAAGTTGCAATTGAGAAGGCTTTTAATGAAGCAGAAGAGTCCATATTCTACAGACATGTAGTGCCCAGGTGTGTTTGGAAGATCCAGAGATGGCTTCAAATTGGTCAAGAGAAGAAGATGACAGAAGCTTGTAAAACACTTGATCAATTCATACATGCACGCATAGCATCTAAGAGAGAGGAGCTAAGCAAGTACAACGAAAATGAAATGGGTGAAGCTCATCATGTTGACTTGTTAACAGCTTTGATGAGAGAAGGAAAAGCACATGACGATAAATTTCTAAGGGATGCTGTGTTCAATCTATTTGTGGCTGGAAGAGATACCATAACTTCAGCTCTCACGTGGTTCTTTTGGCTTGTTGCTACAAACCCCTCAGTTGAAGCCAAGATTCTCGAAGAGATGAAAGAGAAGCTTGGGACCAAAGAAAAGTCGCTTGGGGTTTTAAGCGTGGAGGAAGTGAAAAGGCTGGTTTATCTGCATGGTGCTATATGTGAAGCGTTGCGTCTCTTTCCTCCTATACCCTTTGAGCGCAAGCAAGCAATAAGCTCTGACATGCTTCCTAGTGGTCATCGTGTTAATTCCGGTACAATGATATTATTTTCTTTGTATGCAATGGGAAGATTTGAAGAAACATGGGGAAAAGATTGTTTTGAGTTCAAACCAGAGAGGTGGATCTCAGAGAAAGGAGGTATTGTTTATGTACCATCTTATAAATTCATAGCTTTTAACGCAGGACCTAGGACTTGCTTGGGCAAAGACTCATCCTTCATTCAAATGAAGATGGTGGCAACTGCTATTTTGCACAAGTATCGTGTCCAAGTGGTGGAGGGTTTTGTTGCTACTCCAAGCCTTTCAATTGTTCTTCTTATGAAGGATGGTTTAAAGGTACAGATAACAAAAAGGGAATTATAA 1515 0.4205 MAFHGYAAAPTIAAIFCFLYFFHRRLCCRHPLLTDYPILGMLPQLLFNLWRAHDFFTEILKLHGPTGEFTGPWFTNMDYLVTCDPINVHHMLSKNFHNYVKGPEFRHIFQAFGDGIFTADFEAWKYNRDLFHSLFKQKSFEVFLVKTIHNKVHNGLLPILDHVQQQGRVVDLQDVFNRFTFDNICSIVLGNDPNCLSIDFSEVAIEKAFNEAEESIFYRHVVPRCVWKIQRWLQIGQEKKMTEACKTLDQFIHARIASKREELSKYNENEMGEAHHVDLLTALMREGKAHDDKFLRDAVFNLFVAGRDTITSALTWFFWLVATNPSVEAKILEEMKEKLGTKEKSLGVLSVEEVKRLVYLHGAICEALRLFPPIPFERKQAISSDMLPSGHRVNSGTMILFSLYAMGRFEETWGKDCFEFKPERWISEKGGIVYVPSYKFIAFNAGPRTCLGKDSSFIQMKMVATAILHKYRVQVVEGFVATPSLSIVLLMKDGLKVQITKREL* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0027 504 Pfam Cytochrome P450 36 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0027 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Gso5g0027 504 Gene3D Cytochrome P450 24 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0027 504 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0027 504 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0027 504 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0027 504 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0027 504 SUPERFAMILY Cytochrome P450 35 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0027 504 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0027 504 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0027 504 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0027 504 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0027 504 PANTHER CYTOCHROME P450 FAMILY PROTEIN 10 502 - -
Gso5g0027 504 PANTHER CYTOCHROME P450 10 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0027 Gso-Chr5 225884 227711 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0027 14 504 Cytochrome P450 AT4G39490 47.471 2.59e-168 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0027 - - gmx:100792360 1034.63