Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g0025 ATGGCCATGCTTGCTTATGAGGCAGCAATAATTGCAGCATTCTTCTGCTTCTTATACTTCTTCCATCGGAGACAATGTTGCAGACACCCTCTCTTCACTGACTTTCCCATCCTTGGCATGCTGCCACAATTACTCTTCAATTTGTGGCGAGCCCATGATTATTCAACTCAGGTGTTGAAACAACGTGGGGGCACCGCTGAGTTCACTGGACCTTGGTTTACTAAAATGAACTGCTTGGTCACTGGTGACCCCATCAACGTGCACCATGTCATGAGCAAGAGCTTCCCCAACTACGTCAAGGGACCCGTGTTCCGCGAGATTTTTCAAGCCTTCGGAGATGGGATTTTCACCGCTGATTCCGAGGCTTGGAAATACAACAGGAATCTCTTCCATTCTCTCTTCAAACACAGAAGCTTTGAGGTGTTTCTGGAGAAAACCATTCACAACAAGGTGCAGAATACCCTCCTTCCAATGTTGGATAATCTACAGCAACAAGGGAGGGTGGTGGATCTTCAAGATGTCTTCAATCGCTTCACCTTCGATAACATATGTTCTATGGTTCTTGGATATGACCCTAGTTGCCTTTCAATTGATTTTCCCGAAGTTGAAATTGAGAAGGCTTTTAACCAAGCGGAAGAGTCCATATTCTACAGACAAATAGTGCCAATATGCTTTTGGAAGCTCCAGAAATGGCTTCAAATTGGTCAAGAGAAGAAGATGACAGAAGCATGCAAAACACTTAATCAATTCATACATGCATGTATAGCATCTAAGAGAGAAGAGCTAAACAAGTACAAAGAAAATGAAATGGGTGAAGCTCATAAAGACTTGTTAACAGCTTTGATGAGAGAAGGAAAAGCACATGACGATGGATTTCTAAGGGATTCTGTGTTTAATCTATTTGTGGCTGGAAGAGATACCATAACTTCAGCTCTCACGTGGTTCTTTTGGCTTGTTGCTACAAACCCCTTAGTAGAAGCCAAGATTCTGGAAGAGATAAAAGAACAGTTTGAAACCAATGAGAAGATGCTTGGGGTTTTAACGGTGGAGGAGGTGAAAAAGTTAGTTTATCTGCATGGTGCTATATGTGAAGCATTGAGGCTTTTTCCTCCTATACCTTTTGAGCGCAAGCTAGCAATTAAAGCTGATGTGCTTCCTAGTGGCCATAGTGTTAATTCCAGAACAATGATATTATTTTCTTTGTATGCAATGGGAAGATTTGAAGAAACATGGGGGAAAGATTGTTTGGAATTCAAACCAGAGAGGTGGATCTCAGAGAAAAGAAGTATTGTTTATGTGCCATCTTACAAATTCATTGCTTTTAATGCAGGACCTAGGACTTGCTTGGGTAAAGATTTGTCCTTCTTTCAAATGAAGATGGTGGCAGCTGCTATTTTGAGCAATTACCGTGTCCAAGTGGTGGAAGGTTACGTTGCTACCCCAAGCCTTTCAATTGTTCTTCTTATGAAGGATGGTTTGAAGGTAAAGATAACGAAAAGAGAAATTTAG 1509 0.4155 MAMLAYEAAIIAAFFCFLYFFHRRQCCRHPLFTDFPILGMLPQLLFNLWRAHDYSTQVLKQRGGTAEFTGPWFTKMNCLVTGDPINVHHVMSKSFPNYVKGPVFREIFQAFGDGIFTADSEAWKYNRNLFHSLFKHRSFEVFLEKTIHNKVQNTLLPMLDNLQQQGRVVDLQDVFNRFTFDNICSMVLGYDPSCLSIDFPEVEIEKAFNQAEESIFYRQIVPICFWKLQKWLQIGQEKKMTEACKTLNQFIHACIASKREELNKYKENEMGEAHKDLLTALMREGKAHDDGFLRDSVFNLFVAGRDTITSALTWFFWLVATNPLVEAKILEEIKEQFETNEKMLGVLTVEEVKKLVYLHGAICEALRLFPPIPFERKLAIKADVLPSGHSVNSRTMILFSLYAMGRFEETWGKDCLEFKPERWISEKRSIVYVPSYKFIAFNAGPRTCLGKDLSFFQMKMVAAAILSNYRVQVVEGYVATPSLSIVLLMKDGLKVKITKREI* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g0025 502 Gene3D Cytochrome P450 20 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0025 502 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0025 502 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0025 502 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0025 502 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0025 502 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0025 502 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0025 502 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0025 502 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0025 502 PANTHER CYTOCHROME P450 6 500 - -
Gso5g0025 502 Pfam Cytochrome P450 34 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0025 502 SUPERFAMILY Cytochrome P450 35 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso5g0025 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Gso5g0025 502 PANTHER CYTOCHROME P450 FAMILY PROTEIN 6 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g0025 Gso-Chr5 210880 212561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g0025 1 501 Cytochrome P450 AT2G23180 45.525 8.29e-166 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g0025 - - gmx:100779590 1004.59